Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2560	Rap2ip	Rap2 interacting protein	11		51799
Human Homolog	RPIP8[RaP2 interacting protein 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTTATAG (2) 13.1 0.0131 P8 Cb GC CTAGAGAAGT (3) 1.6 0.0016 P8 Cb GC GCCCTGGCAG (10) 1.6 0.0016 P8 Cb GC TCCAAAGCCT (2) 1.6 0.0016 Cb medulloblastoma GGAAGTGGTG 6.9 0.0069 Cb medulloblastoma AGCACGGAGC (3) 2.3 0.0023 Cb medulloblastoma CTGCGGGAGG (2) 2.3 0.0023 Cb medulloblastoma GCCCTGGCAG (10) 2.3 0.0023 Cb medulloblastoma TTTGTTATAG (2) 2.3 0.0023 P8 GC+1d culture GGAAGTGGTG 12.6 0.0126 P8 GC+1d culture TTTGTTATAG (2) 10.3 0.0103 P8 GC+1d culture GCCCTGGCAG (10) 3.4 0.0034 P8 GC+1d culture GCCCCTGGCA (2) 2.3 0.0023 P8 GC+1d culture CTAGAGAAGT (3) 1.1 0.0011 P8 GC+1d culture CTGGGCCTCT (4) 1.1 0.0011 P8 GC+1d culture CTGGGCTCTG (7) 1.1 0.0011 P8 GC+1d culture TCTTGTCCAT 1.1 0.0011 P8 GC+SHH+1d culture GGAAGTGGTG 12.9 0.0129 P8 GC+SHH+1d culture TTTGTTATAG (2) 11.7 0.0117 P8 GC+SHH+1d culture GCCCTGGCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture CTAGAGAAGT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGGGCCTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTTGTCCAT 1.2 0.0012 3T3 fibroblasts CTGGGCTCTG (7) 14 0.014 E15 cortex GGAAGTGGTG 19.8 0.0198 E15 cortex GCCCTGGCAG (10) 9.9 0.0099 E15 cortex CTAGAGAAGT (3) 4.9 0.0049 E15 cortex CTGGGCTCTG (7) 4.9 0.0049 P1 cortex TTTGTTATAG (2) 9.1 0.0091 P1 cortex CTGGGCTCTG (7) 4.5 0.0045 P1 cortex GGAAGTGGTG 4.5 0.0045 Hypothalamus TTTGTTATAG (2) 14.5 0.0145 Hypothalamus GGAAGTGGTG 5.4 0.0054 Hypothalamus AGCACGGAGC (3) 3.6 0.0036 Hypothalamus GACAACTGCC (3) 3.6 0.0036 Hypothalamus TCTTGTCCAT 3.6 0.0036 Hypothalamus CTGCGGGAGG (2) 1.8 0.0018 Hypothalamus GCCCTGGCAG (10) 1.8 0.0018 E12.5 retina TTTGTTATAG (2) 9.4 0.0094 E12.5 retina CTGGGCTCTG (7) 3.8 0.0038 E12.5 retina GCCCCTGGCA (2) 3.8 0.0038 E12.5 retina GGAAGTGGTG 3.8 0.0038 E12.5 retina CTAGAGAAGT (3) 1.9 0.0019 E12.5 retina TCCAAAGCCT (2) 1.9 0.0019 E14.5 retina TTTGTTATAG (2) 10.9 0.0109 E16.5 retina TTTGTTATAG (2) 16.3 0.0163 E16.5 retina CTAGAGAAGT (3) 5.4 0.0054 E16.5 retina GGAAGTGGTG 3.6 0.0036 E16.5 retina TCTTGTCCAT 1.8 0.0018 E18.5 retina CTAGAGAAGT (3) 1.8 0.0018 E18.5 retina CTGCGGGAGG (2) 1.8 0.0018 E18.5 retina GCCCTGGCAG (10) 1.8 0.0018 E18.5 retina TCCAAAGCCT (2) 1.8 0.0018 E18.5 retina TTTGTTATAG (2) 1.8 0.0018 P0.5 retina GGAAGTGGTG 7.9 0.0079 P0.5 retina CTAGAGAAGT (3) 3.9 0.0039 P0.5 retina TTTGTTATAG (2) 3.9 0.0039 P0.5 retina CTGGGCCTCT (4) 2 0.002 P2.5 retina TTTGTTATAG (2) 5.3 0.0053 P2.5 retina GCCCTGGCAG (10) 3.5 0.0035 P2.5 retina GGAAGTGGTG 3.5 0.0035 P2.5 retina CTAGAGAAGT (3) 1.8 0.0018 P2.5 retina GACAACTGCC (3) 1.8 0.0018 P2.5 retina TCCAAAGCCT (2) 1.8 0.0018 P2.5 retina TCTTGTCCAT 1.8 0.0018 P4.5 retina GGAAGTGGTG 7.9 0.0079 P4.5 retina TTTGTTATAG (2) 5.9 0.0059 P4.5 retina CTAGAGAAGT (3) 4 0.004 P4.5 retina CTGGGCTCTG (7) 2 0.002 P4.5 retina GCCCCTGGCA (2) 2 0.002 P4.5 retina TCTTGTCCAT 2 0.002 P6.5 retina GGAAGTGGTG 11.7 0.0117 P6.5 retina CTAGAGAAGT (3) 10 0.01 P6.5 retina TTTGTTATAG (2) 5 0.005 P6.5 retina CTGGGCCTCT (4) 1.7 0.0017 P10.5 crx- retina CTAGAGAAGT (3) 5.6 0.0056 P10.5 crx- retina GGAAGTGGTG 1.9 0.0019 P10.5 crx- retina TCTTGTCCAT 1.9 0.0019 P10.5 crx- retina TTTGTTATAG (2) 1.9 0.0019 P10.5 crx+ retina GCCCTGGCAG (10) 3.8 0.0038 P10.5 crx+ retina CTAGAGAAGT (3) 1.9 0.0019 P10.5 crx+ retina GGAAGTGGTG 1.9 0.0019 Adult retinal GGAAGTGGTG 7.4 0.0074 Adult retinal AGCACGGAGC (3) 1.9 0.0019 Adult retinal CTGGGCTCTG (7) 1.9 0.0019 Adult retinal GCCCTGGCAG (10) 1.9 0.0019 Adult retinal TTTGTTATAG (2) 1.9 0.0019 ONL CTGGGCTCTG (7) 3.8 0.0038 ONL GGAAGTGGTG 1.9 0.0019