Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.256687
9130020G22Rik
RIKEN cDNA 9130020G22 gene
4
74552
Human Homolog
DJ462O23.2[hypothetical protein dJ462O23.2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCTGCTCTG (
7
)
22.8
0.0228
P8 Cb GC
GACCTGAGTA
(
2
)
9.8
0.0098
P8 Cb GC
AGGGCAGAGG (
3
)
8.2
0.0082
P8 Cb GC
GACGGAGCCC
(
2
)
4.9
0.0049
P8 Cb GC
CAGGAGGAGC (
3
)
3.3
0.0033
P8 Cb GC
GGCCCTGAGT (
12
)
1.6
0.0016
Cb medulloblastoma
GACCTGAGTA
(
2
)
16.2
0.0162
Cb medulloblastoma
AGGGCAGAGG (
3
)
6.9
0.0069
Cb medulloblastoma
GACGGAGCCC
(
2
)
2.3
0.0023
Cb medulloblastoma
GGCTGCTCTG (
7
)
2.3
0.0023
Cb medulloblastoma
GTGGCTGGGG (
7
)
2.3
0.0023
P8 GC+1d culture
GACCTGAGTA
(
2
)
17.1
0.0171
P8 GC+1d culture
GGCTGCTCTG (
7
)
11.4
0.0114
P8 GC+1d culture
TGTTATTTTG
1.1
0.0011
P8 GC+SHH+1d culture
GACCTGAGTA
(
2
)
21.1
0.0211
P8 GC+SHH+1d culture
GGCTGCTCTG (
7
)
18.7
0.0187
P8 GC+SHH+1d culture
AGGGCAGAGG (
3
)
3.5
0.0035
3T3 fibroblasts
GGCTGCTCTG (
7
)
35
0.035
3T3 fibroblasts
GACCTGAGTA
(
2
)
14
0.014
3T3 fibroblasts
CAGGAGGAGC (
3
)
3.5
0.0035
E15 cortex
GGCTGCTCTG (
7
)
49.5
0.0495
E15 cortex
GACCTGAGTA
(
2
)
4.9
0.0049
P1 cortex
AGGGCAGAGG (
3
)
9.1
0.0091
P1 cortex
GACCTGAGTA
(
2
)
4.5
0.0045
Hypothalamus
GACCTGAGTA
(
2
)
25.4
0.0254
Hypothalamus
AGGGCAGAGG (
3
)
9.1
0.0091
Hypothalamus
GGCTGCTCTG (
7
)
7.2
0.0072
Hypothalamus
CAGGAGGAGC (
3
)
1.8
0.0018
E12.5 retina
GACCTGAGTA
(
2
)
31.9
0.0319
E12.5 retina
GGCTGCTCTG (
7
)
30
0.03
E12.5 retina
AGGGCAGAGG (
3
)
3.8
0.0038
E14.5 retina
GGCTGCTCTG (
7
)
51
0.051
E14.5 retina
GACCTGAGTA
(
2
)
10.9
0.0109
E14.5 retina
AGGGCAGAGG (
3
)
1.8
0.0018
E14.5 retina
CAGGAGGAGC (
3
)
1.8
0.0018
E16.5 retina
GGCTGCTCTG (
7
)
41.7
0.0417
E16.5 retina
GACCTGAGTA
(
2
)
19.9
0.0199
E18.5 retina
GACCTGAGTA
(
2
)
34.6
0.0346
E18.5 retina
GGCTGCTCTG (
7
)
23.6
0.0236
E18.5 retina
AGGGCAGAGG (
3
)
3.6
0.0036
E18.5 retina
CAGGAGGAGC (
3
)
1.8
0.0018
E18.5 retina
TGTTATTTTG
1.8
0.0018
P0.5 retina
GACCTGAGTA
(
2
)
27.5
0.0275
P0.5 retina
GGCTGCTCTG (
7
)
21.6
0.0216
P2.5 retina
GACCTGAGTA
(
2
)
21.1
0.0211
P2.5 retina
GGCTGCTCTG (
7
)
21.1
0.0211
P2.5 retina
AGGGCAGAGG (
3
)
5.3
0.0053
P4.5 retina
GACCTGAGTA
(
2
)
31.7
0.0317
P4.5 retina
GGCTGCTCTG (
7
)
23.8
0.0238
P4.5 retina
AGGGCAGAGG (
3
)
21.8
0.0218
P4.5 retina
TGTTATTTTG
4
0.004
P6.5 retina
GGCTGCTCTG (
7
)
30
0.03
P6.5 retina
GACCTGAGTA
(
2
)
13.3
0.0133
P6.5 retina
AGGGCAGAGG (
3
)
3.3
0.0033
P10.5 crx- retina
GACCTGAGTA
(
2
)
27.9
0.0279
P10.5 crx- retina
GGCTGCTCTG (
7
)
11.1
0.0111
P10.5 crx- retina
GGCCCTGAGT (
12
)
1.9
0.0019
P10.5 crx- retina
GTGGCTGGGG (
7
)
1.9
0.0019
P10.5 crx+ retina
GACCTGAGTA
(
2
)
51.9
0.0519
P10.5 crx+ retina
GGCTGCTCTG (
7
)
25
0.025
P10.5 crx+ retina
AGGGCAGAGG (
3
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTGGGG (
7
)
1.9
0.0019
P10.5 crx+ retina
TGTTATTTTG
1.9
0.0019
Adult retinal
GGCTGCTCTG (
7
)
11.1
0.0111
Adult retinal
GACCTGAGTA
(
2
)
9.3
0.0093
Adult retinal
TGTTATTTTG
7.4
0.0074
ONL
GACCTGAGTA
(
2
)
9.6
0.0096
ONL
GGCTGCTCTG (
7
)
7.7
0.0077
ONL
AGGGCAGAGG (
3
)
1.9
0.0019
ONL
GGCCCTGAGT (
12
)
1.9
0.0019
ONL
TGTTATTTTG
1.9
0.0019
