Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257073	Chn1	chimerin (chimaerin) 1	2		108699
Gene Ontology	diacylglycerol binding | GTPase activator activity | intracellular signaling cascade
Human Homolog	CHN1[chimerin (chimaerin) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC AGATCCCCAG (3) 1.6 0.0016 P8 Cb GC ATAGACACCC (2) 1.6 0.0016 P8 Cb GC GCTTAATGTA (4) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CAGTTATTAA (3) 18.5 0.0185 Cb medulloblastoma GCTTAATGTA (4) 9.2 0.0092 Cb medulloblastoma TAACCCCCAA (3) 4.6 0.0046 Cb medulloblastoma TGGGGCCCTC (2) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture AGTCTGCAAA 2.3 0.0023 P8 GC+1d culture CAGTTATTAA (3) 2.3 0.0023 P8 GC+1d culture GCTTAATGTA (4) 1.1 0.0011 P8 GC+1d culture TGGGGCCCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CAGTTATTAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTAAAAGAAA (5) 1.2 0.0012 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CTTTGTATTT (3) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TAACCCCCAA (3) 4.5 0.0045 P1 cortex TTAAAAGAAA (5) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CAGTTATTAA (3) 14.5 0.0145 Hypothalamus TGGGGCCCTC (2) 3.6 0.0036 Hypothalamus CCATTGGTTT (2) 1.8 0.0018 Hypothalamus CTGGGTGACA (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina CAGTTATTAA (3) 5.6 0.0056 E12.5 retina ATAGACACCC (2) 1.9 0.0019 E12.5 retina GCCGCCCTGA 1.9 0.0019 E12.5 retina TATAAAGAAA (3) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CAGTTATTAA (3) 12.8 0.0128 E14.5 retina AGTCTGCAAA 1.8 0.0018 E14.5 retina GCTTAATGTA (4) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina ATAGACACCC (2) 5.4 0.0054 E16.5 retina CAGTTATTAA (3) 3.6 0.0036 E16.5 retina AGATCCCCAG (3) 1.8 0.0018 E16.5 retina AGTCTGCAAA 1.8 0.0018 E16.5 retina CCATTGGTTT (2) 1.8 0.0018 E16.5 retina GCCGCCCTGA 1.8 0.0018 E16.5 retina TATAAAGAAA (3) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CAGTTATTAA (3) 9.1 0.0091 E18.5 retina TAACCCCCAA (3) 5.5 0.0055 E18.5 retina ATAGACACCC (2) 1.8 0.0018 E18.5 retina CTTTGTATTT (3) 1.8 0.0018 E18.5 retina GCCGCCCTGA 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GCTTAATGTA (4) 5.9 0.0059 P0.5 retina TAACCCCCAA (3) 3.9 0.0039 P0.5 retina AGATCCCCAG (3) 2 0.002 P0.5 retina CAGTTATTAA (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina ATAGACACCC (2) 5.3 0.0053 P2.5 retina TAACCCCCAA (3) 3.5 0.0035 P2.5 retina CAGTTATTAA (3) 1.8 0.0018 P2.5 retina GCTTAATGTA (4) 1.8 0.0018 P2.5 retina TGGGGCCCTC (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CAGTTATTAA (3) 7.9 0.0079 P4.5 retina ATAGACACCC (2) 2 0.002 P4.5 retina TAACCCCCAA (3) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAGTTATTAA (3) 11.7 0.0117 P6.5 retina TAACCCCCAA (3) 6.7 0.0067 P6.5 retina ATAGACACCC (2) 5 0.005 P6.5 retina AGATCCCCAG (3) 1.7 0.0017 P6.5 retina CCATTGGTTT (2) 1.7 0.0017 P6.5 retina GCCGCCCTGA 1.7 0.0017 P6.5 retina GCTTAATGTA (4) 1.7 0.0017 P6.5 retina TGGGGCCCTC (2) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CAGTTATTAA (3) 9.3 0.0093 P10.5 crx- retina GCTTAATGTA (4) 5.6 0.0056 P10.5 crx- retina TAACCCCCAA (3) 3.7 0.0037 P10.5 crx- retina ATAGACACCC (2) 1.9 0.0019 P10.5 crx- retina GCCGCCCTGA 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TAACCCCCAA (3) 9.6 0.0096 P10.5 crx+ retina CAGTTATTAA (3) 3.8 0.0038 P10.5 crx+ retina GCTTAATGTA (4) 3.8 0.0038 P10.5 crx+ retina ATAGACACCC (2) 1.9 0.0019 P10.5 crx+ retina CTGGGTGACA (4) 1.9 0.0019 P10.5 crx+ retina CTTTGTATTT (3) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal AGTCTGCAAA 1.9 0.0019 Adult retinal CAGTTATTAA (3) 1.9 0.0019 Adult retinal CTGGGTGACA (4) 1.9 0.0019 Adult retinal TAACCCCCAA (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CTGGGTGACA (4) 1.9 0.0019 ONL TAACCCCCAA (3) 1.9 0.0019 ONL TATAAAGAAA (3) 1.9 0.0019 ONL TTAAAAGAAA (5) 1.9 0.0019