Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257266	2300010F08Rik	RIKEN cDNA 2300010F08 gene	4		71875
Mm.257266	9430087B15Rik	RIKEN cDNA 9430087B15 gene	4		77438
Mm.257266	Epha7	Eph receptor A7	4	4 1.9 cM	13841
Gene Ontology	ATP binding | ephrin receptor activity | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	EPHA7[EphA7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCAGCCAC GTTAAAAAAA (2) TTGGAAATCT (4) 8.1 0.0081 Cb medulloblastoma CTTCTGGGTG (5) GACTGCTATG GTTAAAAAAA (2) 36.9 0.0369 P8 GC+1d culture AAAATGCTCT (3) AGCCAGCCAC CTTCTGGGTG (5) GTTAAAAAAA (2) 18.2 0.0182 P8 GC+SHH+1d culture CTTCTGGGTG (5) GTTAAAAAAA (2) 18.7 0.0187 P1 cortex AAAATGCTCT (3) GAAAGATTGT (3) GTTAAAAAAA (2) 13.5 0.0135 Hypothalamus GAAAGATTGT (3) GTTAAAAAAA (2) TTGGAAATCT (4) 12.7 0.0127 E12.5 retina GGGAACTTGG (3) GTTAAAAAAA (2) TTGGAAATCT (4) 7.6 0.0076 E14.5 retina AGCCAGCCAC CAGACAGAGT GTTAAAAAAA (2) 23.6 0.0236 E16.5 retina GAAAGATTGT (3) GTTAAAAAAA (2) TTGGAAATCT (4) 21.7 0.0217 E18.5 retina GTTAAAAAAA (2) TTGGAAATCT (4) 29.1 0.0291 P0.5 retina GTTAAAAAAA (2) 3.9 0.0039 P2.5 retina CAGACAGAGT GTTAAAAAAA (2) 8.8 0.0088 P4.5 retina CAGACAGAGT GTTAAAAAAA (2) 13.9 0.0139 P6.5 retina CAGACAGAGT GTTAAAAAAA (2) TTGGAAATCT (4) 18.4 0.0184 P10.5 crx- retina AAAATGCTCT (3) GTTAAAAAAA (2) TTGGAAATCT (4) 9.4 0.0094 P10.5 crx+ retina AAAATGCTCT (3) GACTGCTATG GGGAACTTGG (3) GTTAAAAAAA (2) 23 0.023 Adult retinal CAGACAGAGT CTTCTGGGTG (5) 3.8 0.0038 ONL CAGACAGAGT GTTAAAAAAA (2) 5.7 0.0057