Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.257276 1110004P21RikRIKEN cDNA 1110004P21 gene 4    68478 
 Mm.257276 Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 4  4 57.6 cM  71514 
 Gene Ontology biological_process unknown | cellular_component unknown | nucleic acid binding
 Human Homolog SFPQ[splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 195 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (658)203.90.2039
P8 Cb GCGGTCAGCTAA (2)21.20.0212
P8 Cb GCGCAAATCCAA (2)19.60.0196
P8 Cb GCAAAAAAAAAC (24)4.90.0049
P8 Cb GCAATAGCAAAG (2)4.90.0049
P8 Cb GCCGTACTGAGC (2)4.90.0049
P8 Cb GCTTCCTGAATT (8)4.90.0049
P8 Cb GCGACATCAACT (4)3.30.0033
P8 Cb GCGAGGAACTTC (2)3.30.0033
P8 Cb GCGCACATTTGA (3)3.30.0033
P8 Cb GCTTGTGTGCTG (3)3.30.0033
P8 Cb GCAAAACAAAAA (22)1.60.0016
P8 Cb GCATTCCGAATT (107)1.60.0016
P8 Cb GCGATGGGAAAG (10)1.60.0016
P8 Cb GCGGACAAGAGA (6)1.60.0016
Cb medulloblastomaAAAAAAAAAA (658)797.80.7978
Cb medulloblastomaGCAAATCCAA (2)6.90.0069
Cb medulloblastomaGGTCAGCTAA (2)6.90.0069
Cb medulloblastomaAAAAAAAAAC (24)4.60.0046
Cb medulloblastomaGATGGGAAAG (10)4.60.0046
Cb medulloblastomaAAAACAAAAA (22)2.30.0023
Cb medulloblastomaTTATTTTCAA (5)2.30.0023
Cb medulloblastomaTTGTGTGCTG (3)2.30.0023
P8 GC+1d cultureAAAAAAAAAA (658)204.30.2043
P8 GC+1d cultureCGTACTGAGC (2)10.30.0103
P8 GC+1d cultureGGTCAGCTAA (2)10.30.0103
P8 GC+1d cultureAATAGCAAAG (2)9.10.0091
P8 GC+1d cultureAAAACAAAAA (22)3.40.0034
P8 GC+1d cultureTTGTGTGCTG (3)2.30.0023
P8 GC+1d cultureAAAAAAAAAC (24)1.10.0011
P8 GC+1d cultureCACTGGAGGT (2)1.10.0011
P8 GC+1d cultureGACATCAACT (4)1.10.0011
P8 GC+1d cultureGCAAATCCAA (2)1.10.0011
P8 GC+SHH+1d cultureAAAAAAAAAA (658)278.70.2787
P8 GC+SHH+1d cultureCGTACTGAGC (2)11.70.0117
P8 GC+SHH+1d cultureGGTCAGCTAA (2)9.40.0094
P8 GC+SHH+1d cultureAATAGCAAAG (2)70.007
P8 GC+SHH+1d cultureAAAAAAAAAC (24)3.50.0035
P8 GC+SHH+1d cultureAAAACAAAAA (22)2.30.0023
P8 GC+SHH+1d cultureCCCATTCAAA (5)2.30.0023
P8 GC+SHH+1d cultureGCAAATCCAA (2)2.30.0023
P8 GC+SHH+1d cultureTTGTGTGCTG (3)2.30.0023
P8 GC+SHH+1d cultureGACATCAACT (4)1.20.0012
P8 GC+SHH+1d cultureTAGCCCATCC (2)1.20.0012
P8 GC+SHH+1d cultureTATTAAGATT (2)1.20.0012
P8 GC+SHH+1d cultureTTTAACAATC (4)1.20.0012
3T3 fibroblastsAAAAAAAAAA (658)280.028
3T3 fibroblastsTTGTGTGCTG (3)210.021
3T3 fibroblastsCGTACTGAGC (2)70.007
3T3 fibroblastsAATAGCAAAG (2)3.50.0035
3T3 fibroblastsGAACCACTCA (6)3.50.0035
E15 cortexAAAAAAAAAA (658)212.80.2128
E15 cortexTTGTGTGCTG (3)34.60.0346
E15 cortexCCCATTCAAA (5)9.90.0099
E15 cortexCGTACTGAGC (2)9.90.0099
E15 cortexGAGGAACTTC (2)9.90.0099
E15 cortexAAAAAAAAAC (24)4.90.0049
E15 cortexAAAAGAGGAA (4)4.90.0049
E15 cortexGATGGGAAAG (10)4.90.0049
E15 cortexGCACATTTGA (3)4.90.0049
E15 cortexGGTCAGCTAA (2)4.90.0049
E15 cortexTTTAACAATC (4)4.90.0049
P1 cortexAAAAAAAAAA (658)245.40.2454
P1 cortexTTGTGTGCTG (3)54.50.0545
P1 cortexAAAAAAAAAC (24)9.10.0091
P1 cortexAAAAGAGGAA (4)9.10.0091
P1 cortexCGTACTGAGC (2)4.50.0045
P1 cortexGATGGGAAAG (10)4.50.0045
P1 cortexGCACATTTGA (3)4.50.0045
HypothalamusAAAAAAAAAA (658)123.20.1232
HypothalamusGGTCAGCTAA (2)7.20.0072
HypothalamusTTGTGTGCTG (3)5.40.0054
HypothalamusAAAAAAAAAC (24)1.80.0018
HypothalamusAAAACAAAAA (22)1.80.0018
HypothalamusTTATTTTCAA (5)1.80.0018
E12.5 retinaAAAAAAAAAA (658)138.90.1389
E12.5 retinaGGTCAGCTAA (2)11.30.0113
E12.5 retinaCGTACTGAGC (2)7.50.0075
E12.5 retinaAATAGCAAAG (2)5.60.0056
E12.5 retinaTTGTGTGCTG (3)3.80.0038
E12.5 retinaGCACATTTGA (3)1.90.0019
E12.5 retinaGGACAAGAGA (6)1.90.0019
E14.5 retinaAAAAAAAAAA (658)94.70.0947
E14.5 retinaGGTCAGCTAA (2)16.40.0164
E14.5 retinaGAACCACTCA (6)3.60.0036
E14.5 retinaGGACAAGAGA (6)3.60.0036
E14.5 retinaTAGCCCATCC (2)3.60.0036
E14.5 retinaAAAAAAAAAC (24)1.80.0018
E14.5 retinaCGTACTGAGC (2)1.80.0018
E14.5 retinaGAGGAACTTC (2)1.80.0018
E14.5 retinaGCAAATCCAA (2)1.80.0018
E14.5 retinaGTGGTATTAG (2)1.80.0018
E14.5 retinaTTCCTGAATT (8)1.80.0018
E14.5 retinaTTGTGTGCTG (3)1.80.0018
E14.5 retinaTTTAACAATC (4)1.80.0018
E16.5 retinaAAAAAAAAAA (658)43.50.0435
E16.5 retinaGGTCAGCTAA (2)21.70.0217
E16.5 retinaTTGTGTGCTG (3)7.20.0072
E16.5 retinaGCAAATCCAA (2)3.60.0036
E16.5 retinaAAAAAAAAAC (24)1.80.0018
E16.5 retinaAATAGCAAAG (2)1.80.0018
E16.5 retinaGGAGATCCCT (3)1.80.0018
E16.5 retinaTTCCTGAATT (8)1.80.0018
E16.5 retinaTTTAACAATC (4)1.80.0018
E18.5 retinaAAAAAAAAAA (658)374.70.3747
E18.5 retinaGGTCAGCTAA (2)14.60.0146
E18.5 retinaTTGTGTGCTG (3)9.10.0091
E18.5 retinaAATAGCAAAG (2)5.50.0055
E18.5 retinaAAAAAAAAAC (24)3.60.0036
E18.5 retinaCACTGGAGGT (2)3.60.0036
E18.5 retinaCCCATTCAAA (5)1.80.0018
E18.5 retinaGGAGATCCCT (3)1.80.0018
E18.5 retinaTATTAAGATT (2)1.80.0018
E18.5 retinaTTTAACAATC (4)1.80.0018
P0.5 retinaAAAAAAAAAA (658)117.80.1178
P0.5 retinaGGTCAGCTAA (2)29.40.0294
P0.5 retinaCGTACTGAGC (2)7.90.0079
P0.5 retinaTTGTGTGCTG (3)5.90.0059
P0.5 retinaAATAGCAAAG (2)3.90.0039
P0.5 retinaAAAAGAGGAA (4)20.002
P0.5 retinaGTGGTATTAG (2)20.002
P2.5 retinaAAAAAAAAAA (658)329.10.3291
P2.5 retinaGGTCAGCTAA (2)21.10.0211
P2.5 retinaTTGTGTGCTG (3)21.10.0211
P2.5 retinaAATAGCAAAG (2)70.007
P2.5 retinaAAAAAAAAAC (24)5.30.0053
P2.5 retinaCGTACTGAGC (2)1.80.0018
P2.5 retinaGATGGGAAAG (10)1.80.0018
P2.5 retinaTATTAAGATT (2)1.80.0018
P4.5 retinaAAAAAAAAAA (658)283.30.2833
P4.5 retinaGGTCAGCTAA (2)25.80.0258
P4.5 retinaTTGTGTGCTG (3)7.90.0079
P4.5 retinaCCCATTCAAA (5)40.004
P4.5 retinaGTGGTATTAG (2)40.004
P4.5 retinaAAAAAAAAAC (24)20.002
P4.5 retinaAAAAGAGGAA (4)20.002
P4.5 retinaAATAGCAAAG (2)20.002
P4.5 retinaATTCCGAATT (107)20.002
P4.5 retinaCGTACTGAGC (2)20.002
P4.5 retinaGACATCAACT (4)20.002
P4.5 retinaGCAAATCCAA (2)20.002
P4.5 retinaGGACAAGAGA (6)20.002
P4.5 retinaTAGCCCATCC (2)20.002
P4.5 retinaTTCCTGAATT (8)20.002
P6.5 retinaAAAAAAAAAA (658)266.80.2668
P6.5 retinaTTGTGTGCTG (3)150.015
P6.5 retinaGGTCAGCTAA (2)11.70.0117
P6.5 retinaAATAGCAAAG (2)6.70.0067
P6.5 retinaAAAAAAAAAC (24)50.005
P6.5 retinaATTCCGAATT (107)3.30.0033
P6.5 retinaTTTAACAATC (4)3.30.0033
P6.5 retinaAAAACAAAAA (22)1.70.0017
P6.5 retinaCCCATTCAAA (5)1.70.0017
P6.5 retinaCGTACTGAGC (2)1.70.0017
P6.5 retinaGATGGGAAAG (10)1.70.0017
P6.5 retinaGCAAATCCAA (2)1.70.0017
P6.5 retinaTTCCTGAATT (8)1.70.0017
P10.5 crx- retinaAAAAAAAAAA (658)44.60.0446
P10.5 crx- retinaGGTCAGCTAA (2)9.30.0093
P10.5 crx- retinaGTGGTATTAG (2)5.60.0056
P10.5 crx- retinaTTGTGTGCTG (3)5.60.0056
P10.5 crx- retinaAATAGCAAAG (2)3.70.0037
P10.5 crx- retinaAAAAAAAAAC (24)1.90.0019
P10.5 crx- retinaAAAACAAAAA (22)1.90.0019
P10.5 crx- retinaGAGGAACTTC (2)1.90.0019
P10.5 crx- retinaGCAAATCCAA (2)1.90.0019
P10.5 crx- retinaGGACAAGAGA (6)1.90.0019
P10.5 crx- retinaGGAGATCCCT (3)1.90.0019
P10.5 crx+ retinaAAAAAAAAAA (658)96.10.0961
P10.5 crx+ retinaCGTACTGAGC (2)7.70.0077
P10.5 crx+ retinaTTGTGTGCTG (3)7.70.0077
P10.5 crx+ retinaGGTCAGCTAA (2)5.80.0058
P10.5 crx+ retinaAATAGCAAAG (2)3.80.0038
P10.5 crx+ retinaCCCATTCAAA (5)1.90.0019
P10.5 crx+ retinaGATGGGAAAG (10)1.90.0019
P10.5 crx+ retinaGCAAATCCAA (2)1.90.0019
P10.5 crx+ retinaGGACAAGAGA (6)1.90.0019
P10.5 crx+ retinaGTGGTATTAG (2)1.90.0019
Adult retinalAAAAAAAAAA (658)57.40.0574
Adult retinalGGTCAGCTAA (2)11.10.0111
Adult retinalAAAAGAGGAA (4)5.60.0056
Adult retinalTTGTGTGCTG (3)5.60.0056
Adult retinalCGTACTGAGC (2)3.70.0037
Adult retinalAAAACAAAAA (22)1.90.0019
Adult retinalAATAGCAAAG (2)1.90.0019
ONLAAAAAAAAAA (658)103.40.1034
ONLAAAACAAAAA (22)7.70.0077
ONLATTCCGAATT (107)3.80.0038
ONLGGTCAGCTAA (2)3.80.0038
ONLAAAAGAGGAA (4)1.90.0019
ONLAATAGCAAAG (2)1.90.0019
ONLGAGGAACTTC (2)1.90.0019
ONLTATTAAGATT (2)1.90.0019
ONLTTCCTGAATT (8)1.90.0019
ONLTTGTGTGCTG (3)1.90.0019