Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257437	3100003M19Rik	RIKEN cDNA 3100003M19 gene	18		73082
Mm.257437	9430011C21Rik	RIKEN cDNA 9430011C21 gene	18		319791
Mm.257437	Cdh2	cadherin 2	18	18 6.0 cM	12558
Gene Ontology	adherens junction | calcium ion binding | cell adhesion | extracellular space | homophilic cell adhesion | integral to membrane | lamellipodium | membrane | protein binding | synapse
Human Homolog	CDH2[cadherin 2, type 1, N-cadherin (neuronal)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGATTTT (3) TACGGCGGTG (3) TTAATATCTT (3) TTCCGAGTTC (3) 11.5 0.0115 P8 GC+1d culture GAGTGATTTT (3) TACGGCGGTG (3) TTAATATCTT (3) TTCCGAGTTC (3) 21.7 0.0217 P8 GC+SHH+1d culture GAGTGATTTT (3) TACGGCGGTG (3) TTAATATCTT (3) TTCCGAGTTC (3) 11.7 0.0117 3T3 fibroblasts TACGGCGGTG (3) 3.5 0.0035 P1 cortex TTCCGAGTTC (3) 4.5 0.0045 Hypothalamus TTCCGAGTTC (3) 3.6 0.0036 E12.5 retina TTAATATCTT (3) TTCCGAGTTC (3) 11.3 0.0113 E14.5 retina GAGTGATTTT (3) TTAATATCTT (3) TTCCGAGTTC (3) 5.4 0.0054 E16.5 retina GAGTGATTTT (3) TTAATATCTT (3) TTCCGAGTTC (3) 14.4 0.0144 E18.5 retina GAGTGATTTT (3) TACGGCGGTG (3) TTCCGAGTTC (3) 5.4 0.0054 P0.5 retina GAGTGATTTT (3) TACGGCGGTG (3) TTAATATCTT (3) TTCCGAGTTC (3) 17.7 0.0177 P2.5 retina GAGTGATTTT (3) TTAATATCTT (3) TTCCGAGTTC (3) 10.6 0.0106 P4.5 retina GAGTGATTTT (3) TTAATATCTT (3) TTCCGAGTTC (3) 15.9 0.0159 P6.5 retina TACGGCGGTG (3) TTAATATCTT (3) TTCCGAGTTC (3) 8.3 0.0083 P10.5 crx- retina TTAATATCTT (3) 1.9 0.0019 P10.5 crx+ retina GAGTGATTTT (3) TACGGCGGTG (3) TTCCGAGTTC (3) 7.6 0.0076 Adult retinal TACGGCGGTG (3) TTCCGAGTTC (3) 3.8 0.0038