Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257482	AU019300	expressed sequence AU019300	11		104486
Mm.257482	Aatf	apoptosis antagonizing transcription factor	11		56321
Gene Ontology	cell adhesion | cytoplasm | embryonic cleavage | negative regulation of amyloid precursor protein biosynthesis | nucleolus | nucleus | protein binding | regulation of mitotic cell cycle | ribosome biogenesis and assembly
Human Homolog	AATF[apoptosis antagonizing transcription factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCACCTATTG (2) 1.6 0.0016 Cb medulloblastoma GCGGCGCCGC (4) 4.6 0.0046 Cb medulloblastoma ATAAAACCAA (4) 2.3 0.0023 P8 GC+1d culture GCGGCGCCGC (4) 5.7 0.0057 P8 GC+SHH+1d culture GCGGCGCCGC (4) 8.2 0.0082 P8 GC+SHH+1d culture ATAAAACCAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GCACCTATTG (2) 1.2 0.0012 3T3 fibroblasts GCGGCGCCGC (4) 24.5 0.0245 3T3 fibroblasts CCAGCTGGGT (2) 3.5 0.0035 3T3 fibroblasts GTGGTGTGGT (5) 3.5 0.0035 E15 cortex GCGGCGCCGC (4) 9.9 0.0099 P1 cortex GCACCTATTG (2) 4.5 0.0045 P1 cortex GCGGCGCCGC (4) 4.5 0.0045 E12.5 retina CCAGCTGGGT (2) 1.9 0.0019 E12.5 retina GCGGCGCCGC (4) 1.9 0.0019 E14.5 retina ATAAAACCAA (4) 5.5 0.0055 E16.5 retina GCACCTATTG (2) 1.8 0.0018 E16.5 retina GCGGCGCCGC (4) 1.8 0.0018 P0.5 retina GCGGCGCCGC (4) 3.9 0.0039 P0.5 retina AAACTCAGGA (3) 2 0.002 P0.5 retina GCACCTATTG (2) 2 0.002 P4.5 retina GCGGCGCCGC (4) 7.9 0.0079 P4.5 retina GCACCTATTG (2) 4 0.004 P6.5 retina GCGGCGCCGC (4) 6.7 0.0067 P6.5 retina GCACCTATTG (2) 3.3 0.0033 P6.5 retina AAACTCAGGA (3) 1.7 0.0017 P6.5 retina GTGGTGTGGT (5) 1.7 0.0017 P10.5 crx- retina GCGGCGCCGC (4) 16.7 0.0167 P10.5 crx- retina CCAGCTGGGT (2) 1.9 0.0019 P10.5 crx+ retina GCGGCGCCGC (4) 13.5 0.0135 Adult retinal GCGGCGCCGC (4) 13 0.013 Adult retinal AAACTCAGGA (3) 1.9 0.0019 Adult retinal CCAGCTGGGT (2) 1.9 0.0019 ONL GCGGCGCCGC (4) 13.4 0.0134 ONL GTGGTGTGGT (5) 13.4 0.0134 ONL ATAAAACCAA (4) 1.9 0.0019 ONL CCAGCTGGGT (2) 1.9 0.0019