Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.257785
Prdm16
PR domain containing 16
4
70673
Mm.257785
AW743053
expressed sequence AW743053
4
100455
Mm.257785
C130091E20
hypothetical protein C130091E20
4
330006
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
GCTCGTGTTT
(
3
)
6.9
0.0069
Cb medulloblastoma
GGGAAAGCGG (
14
)
4.6
0.0046
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
CACACGCACA (
15
)
1.1
0.0011
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
CACAGCTTTA
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGGTTTTAA
(
8
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
GCTCGTGTTT
(
3
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
GGGAAAGCGG (
14
)
4.5
0.0045
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
CACACGCACA (
15
)
1.8
0.0018
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
CACAGCTTTA
(
6
)
1.8
0.0018
E18.5 retina
GGGAAAGCGG (
14
)
1.8
0.0018
E18.5 retina
TGGGTTTTAA
(
8
)
1.8
0.0018
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
CACACGCACA (
15
)
2
0.002
P0.5 retina
CACAGCTTTA
(
6
)
2
0.002
P0.5 retina
CCCCACTTTT
(
4
)
2
0.002
P0.5 retina
GGGAAAGCGG (
14
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
TGGGTTTTAA
(
8
)
1.8
0.0018
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
CACAGCTTTA
(
6
)
1.9
0.0019
P10.5 crx- retina
GGGAAAGCGG (
14
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
CACACGCACA (
15
)
1.9
0.0019
P10.5 crx+ retina
CCCCACTTTT
(
4
)
1.9
0.0019
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
CACACGCACA (
15
)
1.9
0.0019
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
CACACGCACA (
15
)
5.7
0.0057