Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.257819
4930451A13Rik
RIKEN cDNA 4930451A13 gene
16
67581
Mm.257819
D030022P07Rik
RIKEN cDNA D030022P07 gene
16
320607
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
GTGAAAAAAA (
22
)
4.9
0.0049
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
GTGAAAAAAA (
22
)
43.9
0.0439
Cb medulloblastoma
AAATTGCACC
(
2
)
2.3
0.0023
Cb medulloblastoma
GGAGGCCACT (
3
)
2.3
0.0023
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
GTGAAAAAAA (
22
)
6.8
0.0068
P8 GC+1d culture
AAATTGCACC
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
GTGAAAAAAA (
22
)
10.5
0.0105
P8 GC+SHH+1d culture
AAATTGCACC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GGAGGCCACT (
3
)
1.2
0.0012
3T3 fibroblasts
GGAGGCCACT (
3
)
3.5
0.0035
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
GTGAAAAAAA (
22
)
18.1
0.0181
E12.5 retina
GTGAAAAAAA (
22
)
11.3
0.0113
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E14.5 retina
GTGAAAAAAA (
22
)
12.8
0.0128
E14.5 retina
TCCTTTAAAA
(
3
)
1.8
0.0018
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
GTGAAAAAAA (
22
)
5.4
0.0054
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
E18.5 retina
GTGAAAAAAA (
22
)
20
0.02
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
GTGAAAAAAA (
22
)
7.9
0.0079
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
GTGAAAAAAA (
22
)
10.6
0.0106
P2.5 retina
GGAGGCCACT (
3
)
1.8
0.0018
P2.5 retina
TCCTTTAAAA
(
3
)
1.8
0.0018
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
GTGAAAAAAA (
22
)
23.8
0.0238
P4.5 retina
AAATTGCACC
(
2
)
4
0.004
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
GTGAAAAAAA (
22
)
5
0.005
P6.5 retina
AAATTGCACC
(
2
)
3.3
0.0033
P6.5 retina
TCCTTTAAAA
(
3
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
AAATTGCACC
(
2
)
7.4
0.0074
P10.5 crx- retina
GTGAAAAAAA (
22
)
3.7
0.0037
P10.5 crx+ retina
GTGAAAAAAA (
22
)
5.8
0.0058
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
AAATTGCACC
(
2
)
3.8
0.0038
P10.5 crx+ retina
GGAGGCCACT (
3
)
1.9
0.0019
P10.5 crx+ retina
TCCTTTAAAA
(
3
)
1.9
0.0019
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
GTGAAAAAAA (
22
)
3.7
0.0037
Adult retinal
AAATTGCACC
(
2
)
1.9
0.0019
Adult retinal
TCCTTTAAAA
(
3
)
1.9
0.0019
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
AAATTGCACC
(
2
)
5.7
0.0057
ONL
GTGAAAAAAA (
22
)
5.7
0.0057
ONL
GGAGGCCACT (
3
)
1.9
0.0019
