Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25785
Ldb2
LIM domain binding 2
5
5 B3
16826
Mm.25785
X98549
expressed sequence X98549
5
97285
Mm.25785
AI035351
expressed sequence AI035351
5
100565
Mm.25785
E030026E10Rik
RIKEN cDNA E030026E10 gene
5
320810
Mm.25785
8030487O14Rik
RIKEN cDNA 8030487O14 gene
5
77548
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
TAAAGACACA
(
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CACACAGAGA
(
5
)
1.2
0.0012
E15 cortex
CTGTGCAAAC
(
5
)
TAAAGACACA
(
8
)
14.8
0.0148
P1 cortex
CTGTGCAAAC
(
5
)
TAAAGACACA
(
8
)
18.1
0.0181
Hypothalamus
TATAGAGGAA
(
5
)
1.8
0.0018
E12.5 retina
CACACAGAGA
(
5
)
TAAAGACACA
(
8
)
7.5
0.0075
E14.5 retina
TAAAGACACA
(
8
)
3.6
0.0036
E16.5 retina
TAAAGACACA
(
8
)
1.8
0.0018
E18.5 retina
TAAAGACACA
(
8
)
3.6
0.0036
P0.5 retina
TAAAGACACA
(
8
)
2
0.002
P2.5 retina
CACACAGAGA
(
5
)
TAAAGACACA
(
8
)
5.3
0.0053
P4.5 retina
TAAAGACACA
(
8
)
2
0.002
P10.5 crx- retina
CTGTGCAAAC
(
5
)
1.9
0.0019
P10.5 crx+ retina
TAAAGACACA
(
8
)
TATAGAGGAA
(
5
)
7.6
0.0076
Adult retinal
CTGTGCAAAC
(
5
)
3.7
0.0037
