Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257925	Hipk3	homeodomain interacting protein kinase 3	2		15259
Gene Ontology	ATP binding | cytoplasm | kinase activity | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	HIPK3[homeodomain interacting protein kinase 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TTTTTATTTT (4) 34.3 0.0343 Cb medulloblastoma GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 69.3 0.0693 P8 GC+1d culture GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TTTTTATTTT (4) 28.6 0.0286 P8 GC+SHH+1d culture GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 42.1 0.0421 3T3 fibroblasts GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) 10.5 0.0105 E15 cortex GCAAAAAAAA (2) 9.9 0.0099 P1 cortex GCAAAAAAAA (2) GTATTTAATA (2) 9 0.009 Hypothalamus GCAAAAAAAA (2) GTATTTAATA (2) TGAGAAGGTT TTTTTATTTT (4) 28.9 0.0289 E12.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 13.2 0.0132 E14.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 23.7 0.0237 E16.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 21.7 0.0217 E18.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 32.7 0.0327 P0.5 retina GCAAAAAAAA (2) GCAAACTAGT TTTTTATTTT (4) 21.7 0.0217 P2.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 33.5 0.0335 P4.5 retina GCAAAAAAAA (2) GTATTTAATA (2) TTTTTATTTT (4) 39.7 0.0397 P6.5 retina GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TTTTTATTTT (4) 28.4 0.0284 P10.5 crx- retina GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TTTTTATTTT (4) 20.5 0.0205 P10.5 crx+ retina GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TGAGAAGGTT TTTTTATTTT (4) 15.3 0.0153 Adult retinal GCAAAAAAAA (2) TTTTTATTTT (4) 14.8 0.0148 ONL GCAAAAAAAA (2) GCAAACTAGT GTATTTAATA (2) TGAGAAGGTT TTTTTATTTT (4) 21 0.021