Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258051
Nupl1
nucleoporin like 1
14
71844
Mm.258051
BC010981
cDNA sequence BC010981
407830
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCAAAAC (
40
)
11.4
0.0114
P8 Cb GC
GCTGGCCTCT (
8
)
3.3
0.0033
P8 Cb GC
TTACTGTGTA
(
2
)
3.3
0.0033
Cb medulloblastoma
CAGGCAAAAC (
40
)
4.6
0.0046
Cb medulloblastoma
CACATTGGTT
(
3
)
2.3
0.0023
P8 GC+1d culture
CAGGCAAAAC (
40
)
5.7
0.0057
P8 GC+1d culture
GCTGGCCTCT (
8
)
2.3
0.0023
P8 GC+1d culture
CACATTGGTT
(
3
)
1.1
0.0011
P8 GC+1d culture
TGTTCATTCC
(
2
)
1.1
0.0011
P8 GC+1d culture
TTACTGTGTA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGGCAAAAC (
40
)
11.7
0.0117
P8 GC+SHH+1d culture
AAAATGTCAA (
8
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTGGCCTCT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CACATTGGTT
(
3
)
1.2
0.0012
3T3 fibroblasts
CAGGCAAAAC (
40
)
10.5
0.0105
E15 cortex
CAGGCAAAAC (
40
)
4.9
0.0049
E15 cortex
GCTGGCCTCT (
8
)
4.9
0.0049
P1 cortex
TTACTGTGTA
(
2
)
13.6
0.0136
P1 cortex
CAGGCAAAAC (
40
)
9.1
0.0091
P1 cortex
AAAATGTCAA (
8
)
4.5
0.0045
Hypothalamus
CAGGCAAAAC (
40
)
5.4
0.0054
Hypothalamus
GAATTGCACG
(
2
)
1.8
0.0018
Hypothalamus
TTACTGTGTA
(
2
)
1.8
0.0018
E12.5 retina
CAGGCAAAAC (
40
)
20.7
0.0207
E12.5 retina
GCTGGCCTCT (
8
)
5.6
0.0056
E14.5 retina
CAGGCAAAAC (
40
)
12.8
0.0128
E14.5 retina
GAATTGCACG
(
2
)
1.8
0.0018
E14.5 retina
GCTGGCCTCT (
8
)
1.8
0.0018
E14.5 retina
TAGAGCTGTA (
3
)
1.8
0.0018
E14.5 retina
TGTTCATTCC
(
2
)
1.8
0.0018
E14.5 retina
TTACTGTGTA
(
2
)
1.8
0.0018
E16.5 retina
CAGGCAAAAC (
40
)
9.1
0.0091
E16.5 retina
AGGCCGAGAA
(
2
)
1.8
0.0018
E16.5 retina
GCTGGCCTCT (
8
)
1.8
0.0018
E16.5 retina
TAGAGCTGTA (
3
)
1.8
0.0018
E18.5 retina
CAGGCAAAAC (
40
)
12.7
0.0127
E18.5 retina
AAAATGTCAA (
8
)
1.8
0.0018
E18.5 retina
GCTGGCCTCT (
8
)
1.8
0.0018
E18.5 retina
TTACTGTGTA
(
2
)
1.8
0.0018
P0.5 retina
CAGGCAAAAC (
40
)
13.7
0.0137
P0.5 retina
TTACTGTGTA
(
2
)
11.8
0.0118
P0.5 retina
GCTGGCCTCT (
8
)
2
0.002
P2.5 retina
CAGGCAAAAC (
40
)
24.6
0.0246
P2.5 retina
AAAATGTCAA (
8
)
1.8
0.0018
P2.5 retina
TTACTGTGTA
(
2
)
1.8
0.0018
P4.5 retina
CAGGCAAAAC (
40
)
13.9
0.0139
P4.5 retina
GAATTGCACG
(
2
)
4
0.004
P4.5 retina
AGGCCGAGAA
(
2
)
2
0.002
P4.5 retina
CACATTGGTT
(
3
)
2
0.002
P6.5 retina
CAGGCAAAAC (
40
)
16.7
0.0167
P6.5 retina
TTACTGTGTA
(
2
)
6.7
0.0067
P6.5 retina
GAATTGCACG
(
2
)
5
0.005
P6.5 retina
AAAATGTCAA (
8
)
3.3
0.0033
P10.5 crx- retina
CAGGCAAAAC (
40
)
11.1
0.0111
P10.5 crx- retina
GCTGGCCTCT (
8
)
5.6
0.0056
P10.5 crx- retina
GAATTGCACG
(
2
)
3.7
0.0037
P10.5 crx- retina
AAAATGTCAA (
8
)
1.9
0.0019
P10.5 crx+ retina
CAGGCAAAAC (
40
)
13.5
0.0135
P10.5 crx+ retina
AAAATGTCAA (
8
)
5.8
0.0058
P10.5 crx+ retina
GAATTGCACG
(
2
)
5.8
0.0058
P10.5 crx+ retina
TTACTGTGTA
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGGCCGAGAA
(
2
)
1.9
0.0019
Adult retinal
CAGGCAAAAC (
40
)
11.1
0.0111
Adult retinal
AAAATGTCAA (
8
)
3.7
0.0037
Adult retinal
GAATTGCACG
(
2
)
1.9
0.0019
Adult retinal
GCTGGCCTCT (
8
)
1.9
0.0019
Adult retinal
TTTTTTTTAA (
5
)
1.9
0.0019
ONL
CAGGCAAAAC (
40
)
34.5
0.0345
ONL
GCTGGCCTCT (
8
)
7.7
0.0077
ONL
AAAATGTCAA (
8
)
3.8
0.0038
ONL
TAGAGCTGTA (
3
)
1.9
0.0019
ONL
TGTTCATTCC
(
2
)
1.9
0.0019
