Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258140	Dnajc7	DnaJ (Hsp40) homolog, subfamily C, member 7	11	11 60.0 cM	56354
Mm.258140	D630018G21Rik	RIKEN cDNA D630018G21 gene	11		319789
Mm.258140	C79646	expressed sequence C79646	11		97719
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCCTGTGTA (3) 4.9 0.0049 P8 Cb GC TTAAAAAAGA (10) 4.9 0.0049 P8 Cb GC GACCGTGCCC (4) 3.3 0.0033 P8 Cb GC ACATTTACAA (6) 1.6 0.0016 P8 Cb GC CCTTTCCAGG (4) 1.6 0.0016 P8 Cb GC GACACAGAGC (8) 1.6 0.0016 P8 Cb GC GTTAAACCAA (3) 1.6 0.0016 P8 Cb GC GTTAAAGCAG (3) 1.6 0.0016 Cb medulloblastoma TTAAAAAAGA (10) 6.9 0.0069 Cb medulloblastoma ACCCAGCAGC (4) 4.6 0.0046 Cb medulloblastoma GACACAGAGC (8) 4.6 0.0046 Cb medulloblastoma ACATTTACAA (6) 2.3 0.0023 Cb medulloblastoma GACCGTGCCC (4) 2.3 0.0023 P8 GC+1d culture TTAAAAAAGA (10) 9.1 0.0091 P8 GC+1d culture TCCCTGTGTA (3) 3.4 0.0034 P8 GC+1d culture ACATTTACAA (6) 2.3 0.0023 P8 GC+1d culture ACCCAGCAGC (4) 2.3 0.0023 P8 GC+1d culture AAACCTGGGG (8) 1.1 0.0011 P8 GC+1d culture AGCCCCTGCC (6) 1.1 0.0011 P8 GC+1d culture CATTTAATCC (9) 1.1 0.0011 P8 GC+1d culture GTTAAAGCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture TCCCTGTGTA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTAAAAAAGA (10) 2.3 0.0023 P8 GC+SHH+1d culture ACATTTACAA (6) 1.2 0.0012 P8 GC+SHH+1d culture ACCCAGCAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTCCAGG (4) 1.2 0.0012 P1 cortex GTTAAACCAA (3) 4.5 0.0045 Hypothalamus ACATTTACAA (6) 1.8 0.0018 Hypothalamus TCCCTGTGTA (3) 1.8 0.0018 E12.5 retina TCCCTGTGTA (3) 5.6 0.0056 E12.5 retina TTAAAAAAGA (10) 5.6 0.0056 E12.5 retina ACATTTACAA (6) 3.8 0.0038 E12.5 retina CATTTAATCC (9) 1.9 0.0019 E14.5 retina TTAAAAAAGA (10) 9.1 0.0091 E14.5 retina ACATTTACAA (6) 3.6 0.0036 E14.5 retina GTTAAAGCAG (3) 3.6 0.0036 E14.5 retina TCCCTGTGTA (3) 3.6 0.0036 E16.5 retina ACATTTACAA (6) 3.6 0.0036 E16.5 retina CATTTAATCC (9) 1.8 0.0018 E16.5 retina CCTTTCCAGG (4) 1.8 0.0018 E16.5 retina GACACAGAGC (8) 1.8 0.0018 E16.5 retina GTTAAACCAA (3) 1.8 0.0018 E16.5 retina GTTAAAGCAG (3) 1.8 0.0018 E18.5 retina ACATTTACAA (6) 5.5 0.0055 E18.5 retina AGCCCCTGCC (6) 1.8 0.0018 E18.5 retina TTAAAAAAGA (10) 1.8 0.0018 P0.5 retina TCCCTGTGTA (3) 3.9 0.0039 P0.5 retina ACATTTACAA (6) 2 0.002 P0.5 retina GACACAGAGC (8) 2 0.002 P0.5 retina TTAAAAAAGA (10) 2 0.002 P2.5 retina ACATTTACAA (6) 1.8 0.0018 P2.5 retina CCTTTCCAGG (4) 1.8 0.0018 P2.5 retina GTTAAAGCAG (3) 1.8 0.0018 P4.5 retina ACATTTACAA (6) 11.9 0.0119 P4.5 retina TTAAAAAAGA (10) 5.9 0.0059 P4.5 retina AAACCTGGGG (8) 2 0.002 P4.5 retina GTTAAACCAA (3) 2 0.002 P4.5 retina TCCCTGTGTA (3) 2 0.002 P6.5 retina TCCCTGTGTA (3) 11.7 0.0117 P6.5 retina TTAAAAAAGA (10) 5 0.005 P6.5 retina ACATTTACAA (6) 3.3 0.0033 P6.5 retina CCTTTCCAGG (4) 3.3 0.0033 P6.5 retina AAACCTGGGG (8) 1.7 0.0017 P10.5 crx- retina ACATTTACAA (6) 7.4 0.0074 P10.5 crx- retina TCCCTGTGTA (3) 5.6 0.0056 P10.5 crx- retina TTAAAAAAGA (10) 3.7 0.0037 P10.5 crx- retina AGCCCCTGCC (6) 1.9 0.0019 P10.5 crx+ retina TCCCTGTGTA (3) 7.7 0.0077 P10.5 crx+ retina ACATTTACAA (6) 3.8 0.0038 P10.5 crx+ retina GTTAAACCAA (3) 1.9 0.0019 P10.5 crx+ retina TTAAAAAAGA (10) 1.9 0.0019 Adult retinal ACATTTACAA (6) 3.7 0.0037 Adult retinal TCCCTGTGTA (3) 1.9 0.0019 Adult retinal TTAAAAAAGA (10) 1.9 0.0019 ONL TTAAAAAAGA (10) 5.7 0.0057 ONL ACATTTACAA (6) 1.9 0.0019 ONL TCCCTGTGTA (3) 1.9 0.0019