Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258320
Usp33
ubiquitin specific protease 33
3
3 H3
170822
Mm.258320
9830169D19Rik
RIKEN cDNA 9830169D19 gene
3
320425
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 15 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGACTTTGC
(
3
)
13.1
0.0131
P8 Cb GC
TGGGTGCTGG (
64
)
8.2
0.0082
P8 Cb GC
GGCAGAGAGG (
9
)
1.6
0.0016
P8 Cb GC
TTGATTCTCT
(
3
)
1.6
0.0016
Cb medulloblastoma
GTGACTTTGC
(
3
)
25.4
0.0254
Cb medulloblastoma
TGGGTGCTGG (
64
)
9.2
0.0092
Cb medulloblastoma
TACAGATATA (
3
)
2.3
0.0023
P8 GC+1d culture
GTGACTTTGC
(
3
)
13.7
0.0137
P8 GC+1d culture
TGGGTGCTGG (
64
)
5.7
0.0057
P8 GC+SHH+1d culture
GTGACTTTGC
(
3
)
14.1
0.0141
P8 GC+SHH+1d culture
TGGGTGCTGG (
64
)
3.5
0.0035
P8 GC+SHH+1d culture
GTCGCTCACA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTCTCAAAAT
(
4
)
1.2
0.0012
3T3 fibroblasts
TGGGTGCTGG (
64
)
17.5
0.0175
3T3 fibroblasts
GGCAGAGAGG (
9
)
3.5
0.0035
E15 cortex
TGGGTGCTGG (
64
)
14.8
0.0148
E15 cortex
GGCAGAGAGG (
9
)
4.9
0.0049
E15 cortex
GTGACTTTGC
(
3
)
4.9
0.0049
P1 cortex
TGGGTGCTGG (
64
)
13.6
0.0136
P1 cortex
TACAGATATA (
3
)
4.5
0.0045
Hypothalamus
GTGACTTTGC
(
3
)
9.1
0.0091
Hypothalamus
TGGGTGCTGG (
64
)
9.1
0.0091
Hypothalamus
CTCTCAAAAT
(
4
)
1.8
0.0018
Hypothalamus
TACAGATATA (
3
)
1.8
0.0018
E12.5 retina
TGGGTGCTGG (
64
)
9.4
0.0094
E12.5 retina
CAGTGACTGA (
6
)
1.9
0.0019
E12.5 retina
CTCTCAAAAT
(
4
)
1.9
0.0019
E12.5 retina
GTGACTTTGC
(
3
)
1.9
0.0019
E12.5 retina
TACAGATATA (
3
)
1.9
0.0019
E14.5 retina
TGGGTGCTGG (
64
)
54.7
0.0547
E14.5 retina
GTGACTTTGC
(
3
)
3.6
0.0036
E14.5 retina
GAACCTAGCC
(
3
)
1.8
0.0018
E14.5 retina
GTTTCCCTTT (
7
)
1.8
0.0018
E14.5 retina
TTGATTCTCT
(
3
)
1.8
0.0018
E16.5 retina
TGGGTGCTGG (
64
)
41.7
0.0417
E18.5 retina
TGGGTGCTGG (
64
)
20
0.02
E18.5 retina
GTGACTTTGC
(
3
)
14.6
0.0146
E18.5 retina
TACAGATATA (
3
)
3.6
0.0036
E18.5 retina
TCAAAATATA
(
2
)
1.8
0.0018
P0.5 retina
TGGGTGCTGG (
64
)
11.8
0.0118
P0.5 retina
GTGACTTTGC
(
3
)
3.9
0.0039
P2.5 retina
TGGGTGCTGG (
64
)
17.6
0.0176
P2.5 retina
GTGACTTTGC
(
3
)
10.6
0.0106
P2.5 retina
TACAGATATA (
3
)
3.5
0.0035
P2.5 retina
GTTTCCCTTT (
7
)
1.8
0.0018
P2.5 retina
TCAAAATATA
(
2
)
1.8
0.0018
P4.5 retina
GTGACTTTGC
(
3
)
13.9
0.0139
P4.5 retina
TGGGTGCTGG (
64
)
9.9
0.0099
P6.5 retina
TGGGTGCTGG (
64
)
13.3
0.0133
P6.5 retina
GTGACTTTGC
(
3
)
11.7
0.0117
P6.5 retina
TACAGATATA (
3
)
6.7
0.0067
P10.5 crx- retina
TGGGTGCTGG (
64
)
20.4
0.0204
P10.5 crx- retina
GTGACTTTGC
(
3
)
9.3
0.0093
P10.5 crx- retina
GAACCTAGCC
(
3
)
3.7
0.0037
P10.5 crx- retina
GTCGCTCACA (
2
)
3.7
0.0037
P10.5 crx- retina
TACAGATATA (
3
)
3.7
0.0037
P10.5 crx- retina
AATTTGCATA
(
2
)
1.9
0.0019
P10.5 crx- retina
CTCTCAAAAT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTGACTTTGC
(
3
)
30.8
0.0308
P10.5 crx+ retina
TGGGTGCTGG (
64
)
15.4
0.0154
P10.5 crx+ retina
GTCGCTCACA (
2
)
3.8
0.0038
P10.5 crx+ retina
AATTTGCATA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTGATTCTCT
(
3
)
1.9
0.0019
Adult retinal
GTGACTTTGC
(
3
)
31.5
0.0315
Adult retinal
TGGGTGCTGG (
64
)
13
0.013
Adult retinal
AATTTGCATA
(
2
)
1.9
0.0019
ONL
TGGGTGCTGG (
64
)
40.2
0.0402
ONL
GTGACTTTGC
(
3
)
24.9
0.0249
ONL
CAGTGACTGA (
6
)
1.9
0.0019
ONL
GTCGCTCACA (
2
)
1.9
0.0019
ONL
TACAGATATA (
3
)
1.9
0.0019
ONL
TCAAAATATA
(
2
)
1.9
0.0019
