Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258462
5730591C18Rik
RIKEN cDNA 5730591C18 gene
8
68133
Human Homolog
LOC285615[similar to dJ702J19.1 (glycine cleavage system protein H (aminomethyl carrier))]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGGGTTTT (
4
)
4.9
0.0049
P8 Cb GC
GCGAGACCCT
3.3
0.0033
P8 Cb GC
TTTTTATATT (
4
)
3.3
0.0033
P8 Cb GC
GTCACTCCTC
1.6
0.0016
Cb medulloblastoma
GTGGGGTTTT (
4
)
16.2
0.0162
Cb medulloblastoma
TGCTGTGTTG
(
2
)
6.9
0.0069
Cb medulloblastoma
GCGAGACCCT
2.3
0.0023
P8 GC+1d culture
GTGGGGTTTT (
4
)
11.4
0.0114
P8 GC+1d culture
TGCTGTGTTG
(
2
)
5.7
0.0057
P8 GC+1d culture
TTTTTATATT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGGGTTTT (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TTTTTATATT (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCTGTGTTG
(
2
)
2.3
0.0023
3T3 fibroblasts
TGCTGTGTTG
(
2
)
17.5
0.0175
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GTGGGGTTTT (
4
)
3.5
0.0035
3T3 fibroblasts
TAGCTGTGGC
3.5
0.0035
E15 cortex
GTGGGGTTTT (
4
)
24.7
0.0247
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GTGGGGTTTT (
4
)
4.5
0.0045
P1 cortex
TGCTGTGTTG
(
2
)
4.5
0.0045
P1 cortex
TTTTTATATT (
4
)
4.5
0.0045
Hypothalamus
TGCTGTGTTG
(
2
)
10.9
0.0109
E12.5 retina
GTGGGGTTTT (
4
)
13.1
0.0131
E12.5 retina
TGCTGTGTTG
(
2
)
13.1
0.0131
E12.5 retina
GCGAGACCCT
1.9
0.0019
E12.5 retina
GTCACTCCTC
1.9
0.0019
E12.5 retina
TTTTTATATT (
4
)
1.9
0.0019
E14.5 retina
GTGGGGTTTT (
4
)
10.9
0.0109
E14.5 retina
TGCTGTGTTG
(
2
)
10.9
0.0109
E14.5 retina
GTGAAACAAA
(
2
)
3.6
0.0036
E14.5 retina
TAGCTGTGGC
1.8
0.0018
E14.5 retina
TTTTTATATT (
4
)
1.8
0.0018
E16.5 retina
GTGGGGTTTT (
4
)
16.3
0.0163
E16.5 retina
TTTTTATATT (
4
)
10.9
0.0109
E16.5 retina
TGCTGTGTTG
(
2
)
5.4
0.0054
E16.5 retina
TAGCTGTGGC
1.8
0.0018
E18.5 retina
GTGGGGTTTT (
4
)
12.7
0.0127
E18.5 retina
TGCTGTGTTG
(
2
)
10.9
0.0109
E18.5 retina
TTTTTATATT (
4
)
5.5
0.0055
P0.5 retina
GTGGGGTTTT (
4
)
11.8
0.0118
P0.5 retina
TGCTGTGTTG
(
2
)
11.8
0.0118
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GCGAGACCCT
2
0.002
P2.5 retina
GTGGGGTTTT (
4
)
15.8
0.0158
P2.5 retina
TGCTGTGTTG
(
2
)
10.6
0.0106
P2.5 retina
GTCACTCCTC
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TTTTTATATT (
4
)
1.8
0.0018
P4.5 retina
GTGGGGTTTT (
4
)
19.8
0.0198
P4.5 retina
TGCTGTGTTG
(
2
)
7.9
0.0079
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
GTGAAACAAA
(
2
)
2
0.002
P4.5 retina
TTTTTATATT (
4
)
2
0.002
P6.5 retina
GTGGGGTTTT (
4
)
11.7
0.0117
P6.5 retina
TGCTGTGTTG
(
2
)
6.7
0.0067
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TTTTTATATT (
4
)
1.7
0.0017
P10.5 crx- retina
GTGGGGTTTT (
4
)
11.1
0.0111
P10.5 crx- retina
TGCTGTGTTG
(
2
)
7.4
0.0074
P10.5 crx+ retina
GTGGGGTTTT (
4
)
13.5
0.0135
P10.5 crx+ retina
TGCTGTGTTG
(
2
)
7.7
0.0077
P10.5 crx+ retina
GTGAAACAAA
(
2
)
1.9
0.0019
Adult retinal
GTGGGGTTTT (
4
)
13
0.013
Adult retinal
TGCTGTGTTG
(
2
)
5.6
0.0056
Adult retinal
TTTTTATATT (
4
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GTGGGGTTTT (
4
)
5.7
0.0057
ONL
TGCTGTGTTG
(
2
)
5.7
0.0057
ONL
TTTTTATATT (
4
)
3.8
0.0038
