Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258530	Uble1a	ubiquitin-like 1 (sentrin) activating enzyme E1A	7	7 4.0 cM	56459
Mm.258530	D7Ertd661e	DNA segment, Chr 7, ERATO Doi 661, expressed	7	7 4.0 cM	52144
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GTCAAAAAGA (3) 3.3 0.0033 P8 Cb GC AATTTGTAGA (4) 1.6 0.0016 P8 Cb GC GCTGGCTGGC (10) 1.6 0.0016 P8 Cb GC TCTTTTGGTT (4) 1.6 0.0016 Cb medulloblastoma AAAGGACTTG (6) 2.3 0.0023 Cb medulloblastoma GTCAAAAAGA (3) 2.3 0.0023 Cb medulloblastoma TCTTTTGGTT (4) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TCTTTTGGTT (4) 3.4 0.0034 P8 GC+1d culture GCTGGCTGGC (10) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TCTTTTGGTT (4) 2.3 0.0023 P8 GC+SHH+1d culture GCTGGCTGGC (10) 1.2 0.0012 P8 GC+SHH+1d culture GGTCAAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GTCAAAAAGA (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCTTTTGGTT (4) 7 0.007 3T3 fibroblasts GCTGGCTGGC (10) 3.5 0.0035 E15 cortex CTGGAGCAGA (2) 4.9 0.0049 E15 cortex GGTCAAAAAA (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TCTTTTGGTT (4) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GCTGGCTGGC (10) 4.5 0.0045 P1 cortex TCTTTTGGTT (4) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TCTTTTGGTT (4) 3.6 0.0036 Hypothalamus CTGGAGCAGA (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AATTTGTAGA (4) 1.9 0.0019 E12.5 retina CTGGAGCAGA (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina AATTTGTAGA (4) 1.8 0.0018 E14.5 retina GCTGGCTGGC (10) 1.8 0.0018 E14.5 retina GGTCAAAAAA (7) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TCTTTTGGTT (4) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGTCAAAAAA (7) 1.8 0.0018 P0.5 retina TCTTTTGGTT (4) 9.8 0.0098 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAAGGACTTG (6) 2 0.002 P0.5 retina GCTGGCTGGC (10) 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TCTTTTGGTT (4) 5.3 0.0053 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GGTCAAAAAA (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCTTTTGGTT (4) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GTCAAGAAGA (4) 1.7 0.0017 P10.5 crx- retina TCTTTTGGTT (4) 1.9 0.0019 P10.5 crx+ retina GCTGGCTGGC (10) 3.8 0.0038 P10.5 crx+ retina GTCAAGAAGA (4) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AAAGGACTTG (6) 1.9 0.0019 Adult retinal GTCAAGAAGA (4) 18.5 0.0185 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCTTTTGGTT (4) 1.9 0.0019 ONL GTCAAGAAGA (4) 11.5 0.0115 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TCTTTTGGTT (4) 1.9 0.0019