Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258993
C1qtnf4
C1q and tumor necrosis factor related protein 4
2
2 E1
67445
Mm.258993
9430004J15Rik
RIKEN cDNA 9430004J15 gene
2
77240
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTGCCTGCT
(
3
)
1.6
0.0016
Cb medulloblastoma
ACTGCCTGCT
(
3
)
43.9
0.0439
P8 GC+1d culture
ACTGCCTGCT
(
3
)
3.4
0.0034
P8 GC+SHH+1d culture
ACTGCCTGTC (
4
)
1.2
0.0012
3T3 fibroblasts
CTGCTGCTCT (
9
)
3.5
0.0035
E15 cortex
ACTGCCTGCT
(
3
)
14.8
0.0148
E15 cortex
CTCACAATTG
(
3
)
9.9
0.0099
P1 cortex
ACTGCCTGCT
(
3
)
13.6
0.0136
P1 cortex
CTGCTGCTCT (
9
)
4.5
0.0045
Hypothalamus
ACTGCCTGCT
(
3
)
12.7
0.0127
E12.5 retina
CTGCTGCTCT (
9
)
1.9
0.0019
E16.5 retina
ACTGCCTGCT
(
3
)
10.9
0.0109
E16.5 retina
ACTGCCTGTC (
4
)
1.8
0.0018
E16.5 retina
CTGCTGCTCT (
9
)
1.8
0.0018
E18.5 retina
ACTGCCTGCT
(
3
)
10.9
0.0109
P0.5 retina
ACTGCCTGCT
(
3
)
5.9
0.0059
P2.5 retina
ACTGCCTGCT
(
3
)
7
0.007
P2.5 retina
CTCACAATTG
(
3
)
1.8
0.0018
P4.5 retina
ACTGCCTGCT
(
3
)
21.8
0.0218
P6.5 retina
ACTGCCTGCT
(
3
)
18.3
0.0183
P6.5 retina
ACTGCCTGTC (
4
)
1.7
0.0017
P10.5 crx- retina
ACTGCCTGCT
(
3
)
35.3
0.0353
P10.5 crx+ retina
ACTGCCTGCT
(
3
)
26.9
0.0269
P10.5 crx+ retina
ACTGCCTGTC (
4
)
1.9
0.0019
Adult retinal
ACTGCCTGCT
(
3
)
9.3
0.0093
ONL
ACTGCCTGCT
(
3
)
7.7
0.0077
