Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259278
Sumo1
SMT3 suppressor of mif two 3 homolog 1 (yeast)
1
22218
Mm.259278
D430013B06Rik
RIKEN cDNA D430013B06 gene
1
399594
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGTTTTCAAG
(
2
)
21.2
0.0212
P8 Cb GC
CTGGAACTTC
(
9
)
3.3
0.0033
P8 Cb GC
TCTGACCAGG
(
3
)
3.3
0.0033
P8 Cb GC
ATGTTCTTCT
(
7
)
1.6
0.0016
P8 Cb GC
TGGTTGCTTC
(
4
)
1.6
0.0016
P8 Cb GC
TTTGTAGTCA
(
2
)
1.6
0.0016
Cb medulloblastoma
GGTTTTCAAG
(
2
)
9.2
0.0092
P8 GC+1d culture
GGTTTTCAAG
(
2
)
16
0.016
P8 GC+1d culture
TTTGTAGTCA
(
2
)
4.6
0.0046
P8 GC+1d culture
TCTGACCAGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGTTTTCAAG
(
2
)
16.4
0.0164
P8 GC+SHH+1d culture
TCTGACCAGG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGTAGTCA
(
2
)
1.2
0.0012
3T3 fibroblasts
CTGGAACTTC
(
9
)
3.5
0.0035
3T3 fibroblasts
TGGTTGCTTC
(
4
)
3.5
0.0035
3T3 fibroblasts
TTTGTAGTCA
(
2
)
3.5
0.0035
E15 cortex
GGTTTTCAAG
(
2
)
14.8
0.0148
E15 cortex
TTTGTAGTCC
(
2
)
4.9
0.0049
P1 cortex
GGTTTTCAAG
(
2
)
4.5
0.0045
Hypothalamus
GGTTTTCAAG
(
2
)
21.7
0.0217
Hypothalamus
ATGTTCTTCT
(
7
)
1.8
0.0018
Hypothalamus
CTGGAACTTC
(
9
)
1.8
0.0018
Hypothalamus
TCTGACCAGG
(
3
)
1.8
0.0018
E12.5 retina
GGTTTTCAAG
(
2
)
16.9
0.0169
E12.5 retina
CTGGAACTTC
(
9
)
1.9
0.0019
E12.5 retina
TCTGACCAGG
(
3
)
1.9
0.0019
E12.5 retina
TTTGTAGTCA
(
2
)
1.9
0.0019
E14.5 retina
GGTTTTCAAG
(
2
)
23.7
0.0237
E16.5 retina
GGTTTTCAAG
(
2
)
25.4
0.0254
E16.5 retina
TTTGTAGTCA
(
2
)
3.6
0.0036
E18.5 retina
GGTTTTCAAG
(
2
)
34.6
0.0346
E18.5 retina
ATGTTCTTCT
(
7
)
5.5
0.0055
E18.5 retina
CTGGAACTTC
(
9
)
3.6
0.0036
E18.5 retina
TTTGTAGTCA
(
2
)
3.6
0.0036
E18.5 retina
TGGTTGCTTC
(
4
)
1.8
0.0018
P0.5 retina
GGTTTTCAAG
(
2
)
11.8
0.0118
P0.5 retina
CTGGAACTTC
(
9
)
5.9
0.0059
P0.5 retina
TCTGACCAGG
(
3
)
2
0.002
P0.5 retina
TTTGTAGTCA
(
2
)
2
0.002
P2.5 retina
GGTTTTCAAG
(
2
)
17.6
0.0176
P4.5 retina
GGTTTTCAAG
(
2
)
19.8
0.0198
P4.5 retina
CTGGAACTTC
(
9
)
7.9
0.0079
P6.5 retina
GGTTTTCAAG
(
2
)
15
0.015
P6.5 retina
CTGGAACTTC
(
9
)
3.3
0.0033
P10.5 crx- retina
GGTTTTCAAG
(
2
)
5.6
0.0056
P10.5 crx- retina
TTTGTAGTCA
(
2
)
3.7
0.0037
P10.5 crx- retina
CTGGAACTTC
(
9
)
1.9
0.0019
P10.5 crx+ retina
GGTTTTCAAG
(
2
)
9.6
0.0096
P10.5 crx+ retina
CTGGAACTTC
(
9
)
1.9
0.0019
P10.5 crx+ retina
TCTGACCAGG
(
3
)
1.9
0.0019
Adult retinal
CTGGAACTTC
(
9
)
5.6
0.0056
Adult retinal
TTTGTAGTCC
(
2
)
3.7
0.0037
Adult retinal
GGTTTTCAAG
(
2
)
1.9
0.0019
Adult retinal
TTTGTAGTCA
(
2
)
1.9
0.0019
ONL
GGTTTTCAAG
(
2
)
1.9
0.0019
ONL
TCTGACCAGG
(
3
)
1.9
0.0019
