Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259464	4930500E03Rik	RIKEN cDNA 4930500E03 gene	15		74990
Mm.259464	Prkcabp	protein kinase C, alpha binding protein	15		18693
Gene Ontology	kinase activity | protein binding
Human Homolog	PRKCABP[protein kinase C, alpha binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TTTACTGTCA (3) 11.4 0.0114 P8 Cb GC CACACCTCAG (3) 3.3 0.0033 P8 Cb GC TGTGTAGTTT (5) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma CACACCTCAG (3) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TGTGTAGTTT (5) 2.3 0.0023 P8 GC+1d culture TTTACTGTCA (3) 2.3 0.0023 P8 GC+1d culture CACACCTCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TTTACTGTCA (3) 5.9 0.0059 P8 GC+SHH+1d culture CACACCTCAG (3) 4.7 0.0047 P8 GC+SHH+1d culture TGTGTAGTTT (5) 3.5 0.0035 P8 GC+SHH+1d culture TTAACTTCGA (2) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts TTTACTGTCA (3) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex CACACCTCAG (3) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus CACACCTCAG (3) 3.6 0.0036 Hypothalamus TGTGTAGTTT (5) 3.6 0.0036 Hypothalamus TGGACTCAGG (6) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina CACACCTCAG (3) 7.5 0.0075 E12.5 retina TGTGTAGTTT (5) 1.9 0.0019 E12.5 retina TTAACTTCGA (2) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TGTGTAGTTT (5) 7.3 0.0073 E14.5 retina CACACCTCAG (3) 3.6 0.0036 E14.5 retina TGGACTCAGG (6) 3.6 0.0036 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina CACACCTCAG (3) 12.7 0.0127 E16.5 retina TGTGTAGTTT (5) 5.4 0.0054 E16.5 retina TTTACTGTCA (3) 3.6 0.0036 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina CACACCTCAG (3) 9.1 0.0091 E18.5 retina TGTGTAGTTT (5) 1.8 0.0018 E18.5 retina TTTACTGTCA (3) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGTGTAGTTT (5) 3.9 0.0039 P0.5 retina TTTACTGTCA (3) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina CACACCTCAG (3) 15.8 0.0158 P2.5 retina TTTACTGTCA (3) 5.3 0.0053 P2.5 retina TGTGTAGTTT (5) 3.5 0.0035 P2.5 retina TTAACTTCGA (2) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGTGTAGTTT (5) 5.9 0.0059 P4.5 retina TTTACTGTCA (3) 4 0.004 P4.5 retina CACACCTCAG (3) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina CACACCTCAG (3) 5 0.005 P6.5 retina TGGACTCAGG (6) 5 0.005 P6.5 retina TGTGTAGTTT (5) 1.7 0.0017 P10.5 crx- retina CACACCTCAG (3) 9.3 0.0093 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TGTGTAGTTT (5) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina CACACCTCAG (3) 9.6 0.0096 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal CACACCTCAG (3) 3.7 0.0037 Adult retinal TGTGTAGTTT (5) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TGTGTAGTTT (5) 3.8 0.0038