Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259519
1700085D22Rik
RIKEN cDNA 1700085D22 gene
8
73512
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 77 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GTGGTTCACA (
32
)
14.7
0.0147
P8 Cb GC
TGTTTGGAGC
(
6
)
6.5
0.0065
P8 Cb GC
TTGGCTCACA
(
5
)
3.3
0.0033
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GTGGTTCACA (
32
)
11.6
0.0116
Cb medulloblastoma
TGTTTGGAGC
(
6
)
6.9
0.0069
Cb medulloblastoma
TTGGCTCACA
(
5
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GTGGTTCACA (
32
)
18.3
0.0183
P8 GC+1d culture
TGTTTGGAGC
(
6
)
6.8
0.0068
P8 GC+1d culture
TTGGCTCACA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GTGGTTCACA (
32
)
31.6
0.0316
P8 GC+SHH+1d culture
TGTTTGGAGC
(
6
)
8.2
0.0082
P8 GC+SHH+1d culture
TTGGCTCACA
(
5
)
4.7
0.0047
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GTGGTTCACA (
32
)
17.5
0.0175
3T3 fibroblasts
TTGGCTCACA
(
5
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TTGGCTCACA
(
5
)
29.7
0.0297
E15 cortex
TGTTTGGAGC
(
6
)
14.8
0.0148
E15 cortex
GTGGTTCACA (
32
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GTGGTTCACA (
32
)
27.3
0.0273
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GTGGTTCACA (
32
)
12.7
0.0127
Hypothalamus
TGTTTGGAGC
(
6
)
3.6
0.0036
Hypothalamus
TTGGCTCACA
(
5
)
3.6
0.0036
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
TTGGCTCACA
(
5
)
43.2
0.0432
E12.5 retina
GTGGTTCACA (
32
)
28.2
0.0282
E12.5 retina
TGTTTGGAGC
(
6
)
7.5
0.0075
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GTGGTTCACA (
32
)
51
0.051
E14.5 retina
TTGGCTCACA
(
5
)
21.9
0.0219
E14.5 retina
TGTTTGGAGC
(
6
)
5.5
0.0055
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTGGCTCACA
(
5
)
41.7
0.0417
E16.5 retina
GTGGTTCACA (
32
)
39.8
0.0398
E16.5 retina
TGTTTGGAGC
(
6
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GTGGTTCACA (
32
)
40
0.04
E18.5 retina
TTGGCTCACA
(
5
)
18.2
0.0182
E18.5 retina
TGTTTGGAGC
(
6
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GTGGTTCACA (
32
)
35.3
0.0353
P0.5 retina
TTGGCTCACA
(
5
)
13.7
0.0137
P0.5 retina
TGTTTGGAGC
(
6
)
7.9
0.0079
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GTGGTTCACA (
32
)
12.3
0.0123
P2.5 retina
TTGGCTCACA
(
5
)
7
0.007
P2.5 retina
TGTTTGGAGC
(
6
)
3.5
0.0035
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GTGGTTCACA (
32
)
33.7
0.0337
P4.5 retina
TTGGCTCACA
(
5
)
17.8
0.0178
P4.5 retina
TGTTTGGAGC
(
6
)
4
0.004
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GTGGTTCACA (
32
)
25
0.025
P6.5 retina
TTGGCTCACA
(
5
)
6.7
0.0067
P6.5 retina
TGTTTGGAGC
(
6
)
5
0.005
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GTGGTTCACA (
32
)
20.4
0.0204
P10.5 crx- retina
TGTTTGGAGC
(
6
)
5.6
0.0056
P10.5 crx- retina
TTGGCTCACA
(
5
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GTGGTTCACA (
32
)
32.7
0.0327
P10.5 crx+ retina
TGTTTGGAGC
(
6
)
9.6
0.0096
P10.5 crx+ retina
TTGGCTCACA
(
5
)
5.8
0.0058
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GTGGTTCACA (
32
)
33.3
0.0333
Adult retinal
TTGGCTCACA
(
5
)
13
0.013
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GTGGTTCACA (
32
)
32.6
0.0326
ONL
GAGAGACCCA (
4
)
5.7
0.0057
ONL
TTGGCTCACA
(
5
)
3.8
0.0038
ONL
TGTTTGGAGC
(
6
)
1.9
0.0019
