Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259655	Cdc42bpa	Cdc42 binding protein kinase alpha	1		226751
Gene Ontology	kinase activity
Human Homolog	CDC42BPA[CDC42 binding protein kinase alpha (DMPK-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAACTGTA (4) 4.9 0.0049 P8 Cb GC GATTCTTTTG 3.3 0.0033 P8 Cb GC TTATAGTTTG 3.3 0.0033 Cb medulloblastoma TATGTCAGTA (4) 9.2 0.0092 Cb medulloblastoma GATTCTTTTG 6.9 0.0069 Cb medulloblastoma AAGAGAAGGT (4) 4.6 0.0046 P8 GC+1d culture AAGAGAAGGT (4) 2.3 0.0023 P8 GC+1d culture AGCGTCAGCC 2.3 0.0023 P8 GC+1d culture CAAAACTGTA (4) 2.3 0.0023 P8 GC+SHH+1d culture CAAAACTGTA (4) 3.5 0.0035 P8 GC+SHH+1d culture AAGAGAAGGT (4) 2.3 0.0023 P8 GC+SHH+1d culture GATTCTTTTG 2.3 0.0023 P8 GC+SHH+1d culture TTATAGTTTG 1.2 0.0012 3T3 fibroblasts AGCGTCAGCC 7 0.007 3T3 fibroblasts TTATAGTTTG 3.5 0.0035 E15 cortex TGGGCTCTGG (5) 9.9 0.0099 E15 cortex AAGAGAAGGT (4) 4.9 0.0049 P1 cortex AAGAGAAGGT (4) 4.5 0.0045 P1 cortex CAAAACTGTA (4) 4.5 0.0045 P1 cortex GATTCTTTTG 4.5 0.0045 Hypothalamus TATGTCAGTA (4) 14.5 0.0145 E12.5 retina CAAAACTGTA (4) 16.9 0.0169 E12.5 retina AAGAGAAGGT (4) 7.5 0.0075 E12.5 retina GCCTCAGTGT (3) 1.9 0.0019 E14.5 retina CAAAACTGTA (4) 18.2 0.0182 E14.5 retina TATGTCAGTA (4) 5.5 0.0055 E14.5 retina AAGAGAAGGT (4) 1.8 0.0018 E14.5 retina AGCGTCAGCC 1.8 0.0018 E16.5 retina CAAAACTGTA (4) 19.9 0.0199 E16.5 retina TATGTCAGTA (4) 14.5 0.0145 E16.5 retina GCCTCAGTGT (3) 3.6 0.0036 E16.5 retina AAGAGAAGGT (4) 1.8 0.0018 E16.5 retina GATTCTTTTG 1.8 0.0018 E18.5 retina CAAAACTGTA (4) 30.9 0.0309 E18.5 retina TATGTCAGTA (4) 12.7 0.0127 E18.5 retina AAGAGAAGGT (4) 3.6 0.0036 E18.5 retina GATTCTTTTG 3.6 0.0036 P0.5 retina CAAAACTGTA (4) 23.6 0.0236 P0.5 retina TATGTCAGTA (4) 3.9 0.0039 P0.5 retina GATTCTTTTG 2 0.002 P2.5 retina CAAAACTGTA (4) 45.8 0.0458 P2.5 retina TATGTCAGTA (4) 21.1 0.0211 P2.5 retina AAGAGAAGGT (4) 1.8 0.0018 P2.5 retina AGCGTCAGCC 1.8 0.0018 P2.5 retina GATTCTTTTG 1.8 0.0018 P2.5 retina GCCTCAGTGT (3) 1.8 0.0018 P4.5 retina CAAAACTGTA (4) 57.5 0.0575 P4.5 retina TATGTCAGTA (4) 11.9 0.0119 P4.5 retina GATTCTTTTG 4 0.004 P4.5 retina AAGAGAAGGT (4) 2 0.002 P6.5 retina CAAAACTGTA (4) 11.7 0.0117 P6.5 retina TATGTCAGTA (4) 6.7 0.0067 P6.5 retina AGCGTCAGCC 1.7 0.0017 P6.5 retina TGGGCTCTGG (5) 1.7 0.0017 P10.5 crx- retina TATGTCAGTA (4) 11.1 0.0111 P10.5 crx- retina CAAAACTGTA (4) 7.4 0.0074 P10.5 crx- retina AAGAGAAGGT (4) 3.7 0.0037 P10.5 crx- retina TTATAGTTTG 1.9 0.0019 P10.5 crx+ retina TATGTCAGTA (4) 9.6 0.0096 P10.5 crx+ retina GATTCTTTTG 3.8 0.0038 P10.5 crx+ retina AAGAGAAGGT (4) 1.9 0.0019 P10.5 crx+ retina CAAAACTGTA (4) 1.9 0.0019 Adult retinal GATTCTTTTG 5.6 0.0056 Adult retinal TATGTCAGTA (4) 5.6 0.0056 Adult retinal AGCGTCAGCC 1.9 0.0019 ONL TATGTCAGTA (4) 5.7 0.0057 ONL CAAAACTGTA (4) 3.8 0.0038 ONL AAGAGAAGGT (4) 1.9 0.0019 ONL TGGGCTCTGG (5) 1.9 0.0019