Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259659	Farp1	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	14		223254
Mm.259659	Stk24	serine/threonine kinase 24 (STE20 homolog, yeast)	14		223255
Mm.259659	1810013H02Rik	RIKEN cDNA 1810013H02 gene	14		69763
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGCCCGGGT (3) 1.6 0.0016 P8 Cb GC TGCCACCACA (19) 1.6 0.0016 Cb medulloblastoma TAGCCATCAA (4) 2.3 0.0023 P8 GC+1d culture TAATCCTCAA (3) 1.1 0.0011 P8 GC+SHH+1d culture GAGTATCTTG (9) 2.3 0.0023 P8 GC+SHH+1d culture GCGCCCGGGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TAATCCTCAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCCACCACA (19) 1.2 0.0012 3T3 fibroblasts TGCCACCACA (19) 3.5 0.0035 E15 cortex GAACACTCCC (5) 4.9 0.0049 Hypothalamus TGCCACCACA (19) 5.4 0.0054 Hypothalamus GAGTATCTTG (9) 1.8 0.0018 Hypothalamus GCGCCCGGGT (3) 1.8 0.0018 Hypothalamus TAGCCATCAA (4) 1.8 0.0018 E12.5 retina GCGCCCGGGT (3) 5.6 0.0056 E12.5 retina GAGTATCTTG (9) 3.8 0.0038 E12.5 retina TAATAAAGGC (6) 1.9 0.0019 E12.5 retina TGCCACCACA (19) 1.9 0.0019 E14.5 retina TGCCACCACA (19) 9.1 0.0091 E14.5 retina TAATAAAGGC (6) 1.8 0.0018 E16.5 retina GAGTATCTTG (9) 3.6 0.0036 E16.5 retina GCGCCCGGGT (3) 1.8 0.0018 E16.5 retina TAATCCTCAA (3) 1.8 0.0018 E18.5 retina GAACACTCCC (5) 3.6 0.0036 P0.5 retina TGCCACCACA (19) 13.7 0.0137 P0.5 retina GAGTATCTTG (9) 2 0.002 P0.5 retina TAGCCATCAA (4) 2 0.002 P2.5 retina TAATAAAGGC (6) 1.8 0.0018 P2.5 retina TGCCACCACA (19) 1.8 0.0018 P4.5 retina GAGTATCTTG (9) 4 0.004 P6.5 retina TGCCACCACA (19) 8.3 0.0083 P6.5 retina GAGTATCTTG (9) 5 0.005 P6.5 retina TAGCCATCAA (4) 1.7 0.0017 P10.5 crx- retina TGCCACCACA (19) 3.7 0.0037 P10.5 crx- retina GAGTATCTTG (9) 1.9 0.0019 P10.5 crx+ retina GCGCCCGGGT (3) 1.9 0.0019 P10.5 crx+ retina TGCCACCACA (19) 1.9 0.0019 Adult retinal TGCCACCACA (19) 5.6 0.0056 ONL TGCCACCACA (19) 1.9 0.0019