Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259893	1110031N14Rik	RIKEN cDNA 1110031N14 gene	9		68707
Mm.259893	Topbp1	topoisomerase (DNA) II beta binding protein	9		235559
Gene Ontology	condensed nuclear chromosome | isomerase activity | meiotic recombination
Human Homolog	TOPBP1[topoisomerase (DNA) II binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC CATCCTGAGA (8) 6.5 0.0065 P8 Cb GC TGGATGGTGG (6) 3.3 0.0033 P8 Cb GC TTTTCCTGAT (3) 3.3 0.0033 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CATCCTGAGA (8) 2.3 0.0023 Cb medulloblastoma TTTTCCTGAT (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture AAGCTGGGCT (6) 5.7 0.0057 P8 GC+1d culture GCACTGGTAA (5) 1.1 0.0011 P8 GC+1d culture TGTCACCACT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CATCCTGAGA (8) 4.7 0.0047 P8 GC+SHH+1d culture AAGCTGGGCT (6) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CATCCTGAGA (8) 3.5 0.0035 3T3 fibroblasts TGGATGGTGG (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TGGATGGTGG (6) 4.9 0.0049 E15 cortex TTTTCCTGAT (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AAGCTGGGCT (6) 18.2 0.0182 P1 cortex TGGATGGTGG (6) 9.1 0.0091 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus AAGCTGGGCT (6) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AAGCTGGGCT (6) 1.8 0.0018 E14.5 retina CATCCTGAGA (8) 1.8 0.0018 E14.5 retina TTTTCCTGAT (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TTTTCCTGAT (3) 3.6 0.0036 E16.5 retina AAGCTGGGCT (6) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TTTTCCTGAT (3) 3.6 0.0036 E18.5 retina CATCCTGAGA (8) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina AAGCTGGGCT (6) 5.9 0.0059 P0.5 retina TGTCACCACT (4) 2 0.002 P0.5 retina TTTTCCTGAT (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TTTTCCTGAT (3) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GCACTGGTAA (5) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CATCCTGAGA (8) 1.7 0.0017 P6.5 retina TGGATGGTGG (6) 1.7 0.0017 P6.5 retina TTTTCCTGAT (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina CATCCTGAGA (8) 5.6 0.0056 P10.5 crx- retina GCACTGGTAA (5) 1.9 0.0019 P10.5 crx- retina TTTTCCTGAT (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TGGATGGTGG (6) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAGCTGGGCT (6) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CATCCTGAGA (8) 3.8 0.0038 ONL TGTCACCACT (4) 1.9 0.0019