Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260060
1300007F04Rik
RIKEN cDNA 1300007F04 gene
11
67477
Gene Ontology
extracellular space
|
hydrolase activity
Human Homolog
LOC116236[hypothetical protein LOC116236]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GTGCCTGGGC
(
3
)
4.6
0.0046
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GTGCCTGGGC
(
3
)
5.7
0.0057
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GTGCCTGGGC
(
3
)
2.3
0.0023
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GTGCCTGGGC
(
3
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GTGCCTGGGC
(
3
)
3.6
0.0036
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GTGCCTGGGC
(
3
)
3.6
0.0036
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GTGCCTGGGC
(
3
)
3.9
0.0039
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
GTGCCTGGGC
(
3
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GTGCCTGGGC
(
3
)
4
0.004
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GTGCCTGGGC
(
3
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GTGCCTGGGC
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GTGCCTGGGC
(
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GTGCCTGGGC
(
3
)
3.7
0.0037
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GTGCCTGGGC
(
3
)
3.8
0.0038
