Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260064	Eif3s4	eukaryotic translation initiation factor 3, subunit 4 (delta)	9		53356
Gene Ontology	protein biosynthesis | RNA binding | translation initiation factor activity
Human Homolog	EIF3S4[eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CAGAAGGAGC (3) 3.3 0.0033 P8 Cb GC CAGATAGAGC (4) 1.6 0.0016 P8 Cb GC CAGCCAAACC (2) 1.6 0.0016 P8 Cb GC GACTCCCCAC (4) 1.6 0.0016 Cb medulloblastoma CAGATAGAGC (4) 11.6 0.0116 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma CAGGCCAAAC (2) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CAGCCAAACC (2) 11.4 0.0114 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture CAGATAGAGC (4) 3.4 0.0034 P8 GC+SHH+1d culture CAGCCAAACC (2) 11.7 0.0117 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CAGATAGAGC (4) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts CAGCCAAACC (2) 14 0.014 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex CAGATAGAGC (4) 4.9 0.0049 E15 cortex CAGCCAAACC (2) 4.9 0.0049 E15 cortex CAGGCCAAAC (2) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CAGAAGGAGC (3) 3.6 0.0036 Hypothalamus CAGCCAAACC (2) 3.6 0.0036 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus CAGATAGAGC (4) 1.8 0.0018 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CAGATAGAGC (4) 9.4 0.0094 E12.5 retina CAGCCAAACC (2) 7.5 0.0075 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GACTCCCCAC (4) 3.8 0.0038 E12.5 retina CAGACAAACC (4) 1.9 0.0019 E12.5 retina CAGGCCAAAC (2) 1.9 0.0019 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CAGATAGAGC (4) 14.6 0.0146 E14.5 retina CAGCCAAACC (2) 3.6 0.0036 E14.5 retina CAGACAAACC (4) 1.8 0.0018 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina CAGCCAAACC (2) 16.3 0.0163 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CAGACAAACC (4) 1.8 0.0018 E16.5 retina CAGATAGAGC (4) 1.8 0.0018 E18.5 retina CAGATAGAGC (4) 12.7 0.0127 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina CAGAAGGAGC (3) 1.8 0.0018 E18.5 retina CAGCCAAACC (2) 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina CAGCCAAACC (2) 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CAGATAGAGC (4) 3.9 0.0039 P0.5 retina CAAACGAGAG 2 0.002 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina CAGATAGAGC (4) 14.1 0.0141 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CAGCCAAACC (2) 3.5 0.0035 P2.5 retina CAAACGAGAG 1.8 0.0018 P2.5 retina CAGAAGGAGC (3) 1.8 0.0018 P2.5 retina CAGACAAACC (4) 1.8 0.0018 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina CAGATAGAGC (4) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CAGCCAAACC (2) 5.9 0.0059 P4.5 retina CAGACAAACC (4) 2 0.002 P4.5 retina CAGGCCAAAC (2) 2 0.002 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina CAGCCAAACC (2) 11.7 0.0117 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CAGATAGAGC (4) 6.7 0.0067 P6.5 retina CAGGCCAAAC (2) 1.7 0.0017 P6.5 retina GACTCCCCAC (4) 1.7 0.0017 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina CAGATAGAGC (4) 9.3 0.0093 P10.5 crx- retina CAGCCAAACC (2) 9.3 0.0093 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina CAGACAAACC (4) 3.8 0.0038 P10.5 crx+ retina CAGGCCAAAC (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CAGATAGAGC (4) 1.9 0.0019 P10.5 crx+ retina CAGCCAAACC (2) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal CAGCCAAACC (2) 11.1 0.0111 Adult retinal CAGATAGAGC (4) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CAAACGAGAG 1.9 0.0019 Adult retinal CAGGCCAAAC (2) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL CAGCCAAACC (2) 11.5 0.0115 ONL CAGATAGAGC (4) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL CAGACAAACC (4) 1.9 0.0019