Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26017	Tloc1	translocation protein 1	3		69276
Mm.26017	4933429H19Rik	RIKEN cDNA 4933429H19 gene	3		71280
Gene Ontology	membrane | receptor activity | transport | transporter activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTACCAAGG ATGGGTCATC (3) GACCAGAAGG (3) GTTTTTGTTT (2) TATTTTAATA (2) 14.6 0.0146 Cb medulloblastoma AGTACCAAGG ATGGGTCATC (3) GAATGTTGGC (2) 6.9 0.0069 P8 GC+1d culture AGTACCAAGG ATGTACAGAT (2) GACCAGAAGG (3) GAGAATTGTT (3) GTTCTCATCA GTTTTTGTTT (2) 12.4 0.0124 P8 GC+SHH+1d culture AGTACCAAGG ATGGGTCATC (3) GAATGTTGGC (2) GAGAATTGTT (3) GTTTTTGTTT (2) TATTTTAATA (2) 15.3 0.0153 3T3 fibroblasts ATGGGTCATC (3) 17.5 0.0175 E15 cortex ATGGGTCATC (3) 19.8 0.0198 P1 cortex ATGGGTCATC (3) 9.1 0.0091 Hypothalamus ATGGGTCATC (3) GAGAATTGTT (3) GTTTTGGTTT (2) GTTTTTGTTT (2) TATTTTAATA (2) 9 0.009 E12.5 retina AGTACCAAGG ATGTACAGAT (2) 3.8 0.0038 E14.5 retina AGTACCAAGG ATGGGTCATC (3) GACCAGAAGG (3) GTTTTGGTTT (2) 7.2 0.0072 E16.5 retina ATGGGTCATC (3) GACCAGAAGG (3) GTTTTTGTTT (2) TATTTTAATA (2) 9 0.009 E18.5 retina ATGGGTCATC (3) ATGTACAGAT (2) GTTCTCATCA GTTTTTGTTT (2) 7.2 0.0072 P0.5 retina AGTACCAAGG ATGGGTCATC (3) ATGTACAGAT (2) 11.8 0.0118 P2.5 retina AGTACCAAGG ATGGGTCATC (3) ATGTACAGAT (2) 8.8 0.0088 P4.5 retina ATGGGTCATC (3) GAGAATTGTT (3) GTTCTCATCA GTTTTTGTTT (2) 10 0.01 P6.5 retina AGTACCAAGG ATGGGTCATC (3) GAATGTTGGC (2) GTTTTGGTTT (2) GTTTTTGTTT (2) TCACAGACAA 13.5 0.0135 P10.5 crx- retina AGTACCAAGG ATGGGTCATC (3) GTTTTTGTTT (2) TATTTTAATA (2) 18.7 0.0187 P10.5 crx+ retina AGTACCAAGG ATGGGTCATC (3) GAATGTTGGC (2) GACCAGAAGG (3) GAGAATTGTT (3) GTTTTGGTTT (2) TCACAGACAA 17.2 0.0172 Adult retinal ATGGGTCATC (3) GAATGTTGGC (2) GTTTTTGTTT (2) 7.5 0.0075 ONL AGTACCAAGG 3.8 0.0038