Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260360
BC053460
cDNA sequence BC053460
8
382014
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 93 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCAAGGCCC (
5
)
4.9
0.0049
P8 Cb GC
CTCCACGTCC
(
2
)
3.3
0.0033
P8 Cb GC
GACTAGCCCG
(
2
)
1.6
0.0016
P8 Cb GC
TAGCCATCCC (
5
)
1.6
0.0016
Cb medulloblastoma
TGCAAGGCCC (
5
)
11.6
0.0116
Cb medulloblastoma
CTCCACGTCC
(
2
)
4.6
0.0046
Cb medulloblastoma
GACTAGCCCG
(
2
)
4.6
0.0046
Cb medulloblastoma
TATTTATTTT (
9
)
2.3
0.0023
Cb medulloblastoma
TGTATCTGGA
(
4
)
2.3
0.0023
P8 GC+1d culture
CTCCACGTCC
(
2
)
8
0.008
P8 GC+1d culture
TGCAAGGCCC (
5
)
8
0.008
P8 GC+1d culture
GACTAGCCCG
(
2
)
4.6
0.0046
P8 GC+1d culture
TGTATCTGGA
(
4
)
4.6
0.0046
P8 GC+1d culture
TAGCCATCCC (
5
)
3.4
0.0034
P8 GC+1d culture
GTTTTTTTAA (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CTCCACGTCC
(
2
)
7
0.007
P8 GC+SHH+1d culture
GACTAGCCCG
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
TAGCCATCCC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TGCAAGGCCC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TGTATCTGGA
(
4
)
2.3
0.0023
3T3 fibroblasts
TGCAAGGCCC (
5
)
7
0.007
3T3 fibroblasts
TGTATCTGGA
(
4
)
7
0.007
3T3 fibroblasts
CTCCACGTCC
(
2
)
3.5
0.0035
E15 cortex
TGCAAGGCCC (
5
)
9.9
0.0099
P1 cortex
TGCAAGGCCC (
5
)
13.6
0.0136
Hypothalamus
TGCAAGGCCC (
5
)
9.1
0.0091
Hypothalamus
GACTAGCCCG
(
2
)
3.6
0.0036
Hypothalamus
TAGCCATCCC (
5
)
3.6
0.0036
Hypothalamus
CACTTTTTGA
1.8
0.0018
Hypothalamus
CCGGAGGACA
(
2
)
1.8
0.0018
Hypothalamus
CGCGCGCACA (
7
)
1.8
0.0018
E12.5 retina
CGCGCGCACA (
7
)
1.9
0.0019
E12.5 retina
GACTAGCCCG
(
2
)
1.9
0.0019
E12.5 retina
TAGCCATCCC (
5
)
1.9
0.0019
E12.5 retina
TGCAAGGCCC (
5
)
1.9
0.0019
E12.5 retina
TGTATCTGGA
(
4
)
1.9
0.0019
E14.5 retina
TGCAAGGCCC (
5
)
9.1
0.0091
E14.5 retina
GACTAGCCCG
(
2
)
3.6
0.0036
E14.5 retina
CGCGCGCACA (
7
)
1.8
0.0018
E14.5 retina
TATTTATTTT (
9
)
1.8
0.0018
E14.5 retina
TGTATCTGGA
(
4
)
1.8
0.0018
E16.5 retina
TGCAAGGCCC (
5
)
5.4
0.0054
E16.5 retina
TGTATCTGGA
(
4
)
5.4
0.0054
E16.5 retina
GACTAGCCCG
(
2
)
3.6
0.0036
E16.5 retina
TAGCCATCCC (
5
)
1.8
0.0018
E18.5 retina
TGCAAGGCCC (
5
)
7.3
0.0073
E18.5 retina
CCGGAGGACA
(
2
)
3.6
0.0036
E18.5 retina
GACTAGCCCG
(
2
)
3.6
0.0036
E18.5 retina
CTCCACGTCC
(
2
)
1.8
0.0018
E18.5 retina
TGTATCTGGA
(
4
)
1.8
0.0018
P0.5 retina
TGCAAGGCCC (
5
)
5.9
0.0059
P0.5 retina
GACTAGCCCG
(
2
)
3.9
0.0039
P0.5 retina
TGTATCTGGA
(
4
)
3.9
0.0039
P0.5 retina
CACTTTTTGA
2
0.002
P0.5 retina
CCGGAGGACA
(
2
)
2
0.002
P0.5 retina
CTCCACGTCC
(
2
)
2
0.002
P0.5 retina
GTTTTTTTAA (
7
)
2
0.002
P0.5 retina
TAGCCATCCC (
5
)
2
0.002
P2.5 retina
GACTAGCCCG
(
2
)
8.8
0.0088
P2.5 retina
TGCAAGGCCC (
5
)
7
0.007
P2.5 retina
TGTATCTGGA
(
4
)
7
0.007
P2.5 retina
TAGCCATCCC (
5
)
3.5
0.0035
P2.5 retina
CACTTTTTGA
1.8
0.0018
P2.5 retina
CTCCACGTCC
(
2
)
1.8
0.0018
P4.5 retina
TGCAAGGCCC (
5
)
7.9
0.0079
P4.5 retina
GACTAGCCCG
(
2
)
5.9
0.0059
P4.5 retina
TGTATCTGGA
(
4
)
4
0.004
P4.5 retina
CCGGAGGACA
(
2
)
2
0.002
P4.5 retina
GTTTTTTTAA (
7
)
2
0.002
P4.5 retina
TAGCCATCCC (
5
)
2
0.002
P6.5 retina
TGCAAGGCCC (
5
)
10
0.01
P6.5 retina
GACTAGCCCG
(
2
)
5
0.005
P6.5 retina
CTCCACGTCC
(
2
)
3.3
0.0033
P6.5 retina
TGTATCTGGA
(
4
)
3.3
0.0033
P6.5 retina
CGCGCGCACA (
7
)
1.7
0.0017
P6.5 retina
GTTTTTTTAA (
7
)
1.7
0.0017
P6.5 retina
TAGCCATCCC (
5
)
1.7
0.0017
P10.5 crx- retina
CTCCACGTCC
(
2
)
9.3
0.0093
P10.5 crx- retina
TGCAAGGCCC (
5
)
7.4
0.0074
P10.5 crx- retina
TGTATCTGGA
(
4
)
3.7
0.0037
P10.5 crx+ retina
TGCAAGGCCC (
5
)
5.8
0.0058
Adult retinal
TGCAAGGCCC (
5
)
11.1
0.0111
Adult retinal
CGCGCGCACA (
7
)
5.6
0.0056
Adult retinal
GACTAGCCCG
(
2
)
3.7
0.0037
Adult retinal
TGTATCTGGA
(
4
)
3.7
0.0037
Adult retinal
GTTTTTTTAA (
7
)
1.9
0.0019
Adult retinal
TATTTATTTT (
9
)
1.9
0.0019
ONL
GACTAGCCCG
(
2
)
3.8
0.0038
ONL
TGCAAGGCCC (
5
)
3.8
0.0038
ONL
TGTATCTGGA
(
4
)
3.8
0.0038
ONL
CGCGCGCACA (
7
)
1.9
0.0019
ONL
CTCCACGTCC
(
2
)
1.9
0.0019
ONL
GTTTTTTTAA (
7
)
1.9
0.0019
