Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260374	Sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	15	15 19.7 cM	20356
Gene Ontology	axon guidance | axon guidance receptor activity | development | extracellular space | integral to membrane | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA5A[sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCCAAGAT 3.3 0.0033 P8 Cb GC GAAACCTGTC 1.6 0.0016 Cb medulloblastoma GAAACCTGTC 2.3 0.0023 P8 GC+SHH+1d culture GAAACCTGTC 2.3 0.0023 3T3 fibroblasts GAAACCTGTC 3.5 0.0035 E15 cortex GAAACCTGTC 9.9 0.0099 E15 cortex GAACCAATTA 4.9 0.0049 Hypothalamus GAAACCTGTC 1.8 0.0018 E12.5 retina GAAACCTGTC 11.3 0.0113 E12.5 retina GAACCAATTG 1.9 0.0019 E14.5 retina GAAACCTGTC 7.3 0.0073 E14.5 retina GAACCAATTG 1.8 0.0018 E18.5 retina GAAACCTGTC 1.8 0.0018 E18.5 retina GAACCAATTA 1.8 0.0018 P2.5 retina GAAACCTGTC 5.3 0.0053 P4.5 retina GAAACCTGTC 5.9 0.0059 P4.5 retina TGGCCAAGAT 2 0.002 P6.5 retina GAAACCTGTC 6.7 0.0067 P6.5 retina GAACCAATTA 1.7 0.0017 P6.5 retina GAACCAATTG 1.7 0.0017 P10.5 crx- retina GAAACCTGTC 1.9 0.0019 Adult retinal GAAACCTGTC 1.9 0.0019 ONL GAAACCTGTC 1.9 0.0019