Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260456	Vapb	vesicle-associated membrane protein, associated protein B and C	2	2 103.0 cM	56491
Gene Ontology	biological_process unknown | integral to membrane | structural molecule activity
Human Homolog	VAPB[VAMP (vesicle-associated membrane protein)-associated protein B and C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCATAAAAGA 1.6 0.0016 P8 Cb GC CGTAAAAAGA 1.6 0.0016 Cb medulloblastoma CCATAAAAGA 11.6 0.0116 P8 GC+1d culture CCATAAAAGA 6.8 0.0068 P8 GC+1d culture CGTAAAAAGA 1.1 0.0011 P8 GC+1d culture GGTTAAAAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCATAAAAGA 8.2 0.0082 P8 GC+SHH+1d culture GTTTTATGGC (5) 1.2 0.0012 E15 cortex CCATAAAAGA 4.9 0.0049 P1 cortex CCATAAAAGA 4.5 0.0045 Hypothalamus CCATAAAAGA 5.4 0.0054 Hypothalamus GTTTTATGGC (5) 1.8 0.0018 E12.5 retina CCATAAAAGA 3.8 0.0038 E12.5 retina CGTAAAAAGA 3.8 0.0038 E14.5 retina CCATAAAAGA 3.6 0.0036 E14.5 retina GGTTAAAAAG (2) 1.8 0.0018 E16.5 retina CCATAAAAGA 12.7 0.0127 E18.5 retina CCATAAAAGA 7.3 0.0073 P0.5 retina GGTTAAAAAG (2) 2 0.002 P2.5 retina CCATAAAAGA 5.3 0.0053 P2.5 retina TTGGGGCTGG (2) 1.8 0.0018 P4.5 retina CCATAAAAGA 4 0.004 P6.5 retina CCATAAAAGA 3.3 0.0033 P10.5 crx- retina CCATAAAAGA 5.6 0.0056 P10.5 crx- retina GTTTTATGGC (5) 3.7 0.0037 P10.5 crx- retina GGTTAAAAAG (2) 1.9 0.0019 P10.5 crx+ retina CCATAAAAGA 7.7 0.0077 P10.5 crx+ retina TTGGGGCTGG (2) 1.9 0.0019 Adult retinal CCATAAAAGA 5.6 0.0056 ONL CCATAAAAGA 3.8 0.0038 ONL TTGGGGCTGG (2) 3.8 0.0038