Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260557
BC057552
cDNA sequence BC057552
8
212123
Human Homolog
LOC90379[hypothetical protein BC002926]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGATGATGA (
16
)
3.3
0.0033
P8 Cb GC
AAAGCCAAAA
(
6
)
1.6
0.0016
P8 Cb GC
TACTAAATGC
(
2
)
1.6
0.0016
Cb medulloblastoma
ATGATGATGA (
16
)
2.3
0.0023
Cb medulloblastoma
TACTAAATGC
(
2
)
2.3
0.0023
P8 GC+1d culture
TACTAAATGC
(
2
)
8
0.008
P8 GC+1d culture
AAAGCCAAAA
(
6
)
1.1
0.0011
P8 GC+1d culture
ATGATGATGA (
16
)
1.1
0.0011
P8 GC+SHH+1d culture
TACTAAATGC
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
ATGATGATGA (
16
)
3.5
0.0035
P1 cortex
CTTTTTTTTC (
8
)
4.5
0.0045
Hypothalamus
TACTAAATGC
(
2
)
3.6
0.0036
E12.5 retina
ATGATGATGA (
16
)
9.4
0.0094
E12.5 retina
TACTAAATGC
(
2
)
7.5
0.0075
E12.5 retina
AAATGGCTGG
(
3
)
1.9
0.0019
E12.5 retina
CTTTTTTTTC (
8
)
1.9
0.0019
E14.5 retina
TACTAAATGC
(
2
)
9.1
0.0091
E14.5 retina
ATGATGATGA (
16
)
3.6
0.0036
E14.5 retina
AAATGGCTGG
(
3
)
1.8
0.0018
E16.5 retina
TACTAAATGC
(
2
)
12.7
0.0127
E16.5 retina
AAATGGCTGG
(
3
)
5.4
0.0054
E16.5 retina
ATGATGATGA (
16
)
3.6
0.0036
E16.5 retina
CTTTTTTTTC (
8
)
1.8
0.0018
E18.5 retina
TACTAAATGC
(
2
)
14.6
0.0146
E18.5 retina
ATGATGATGA (
16
)
7.3
0.0073
P0.5 retina
ATGATGATGA (
16
)
9.8
0.0098
P0.5 retina
TACTAAATGC
(
2
)
5.9
0.0059
P0.5 retina
AAATGGCTGG
(
3
)
2
0.002
P2.5 retina
ATGATGATGA (
16
)
17.6
0.0176
P2.5 retina
AAATGGCTGG
(
3
)
5.3
0.0053
P2.5 retina
TACTAAATGC
(
2
)
3.5
0.0035
P4.5 retina
TACTAAATGC
(
2
)
9.9
0.0099
P6.5 retina
TACTAAATGC
(
2
)
13.3
0.0133
P6.5 retina
ATGATGATGA (
16
)
5
0.005
P6.5 retina
AAAGCCAAAA
(
6
)
1.7
0.0017
P6.5 retina
AAATGGCTGG
(
3
)
1.7
0.0017
P10.5 crx- retina
AAATGGCTGG
(
3
)
5.6
0.0056
P10.5 crx- retina
TACTAAATGC
(
2
)
5.6
0.0056
P10.5 crx+ retina
TACTAAATGC
(
2
)
7.7
0.0077
P10.5 crx+ retina
AAATGGCTGG
(
3
)
3.8
0.0038
Adult retinal
TACTAAATGC
(
2
)
1.9
0.0019
ONL
ATGATGATGA (
16
)
3.8
0.0038
ONL
AAATGGCTGG
(
3
)
1.9
0.0019
ONL
TACTAAATGC
(
2
)
1.9
0.0019
