Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260568	L1cam	L1 cell adhesion molecule	X	X 29.51 cM	16728
Gene Ontology	axon guidance | cell adhesion | cell surface | development | integral to membrane | neurogenesis | plasma membrane | protein binding
Human Homolog	L1CAM[L1 cell adhesion molecule (hydrocephalus, stenosis of aqueduct of Sylvius 1, MASA (mental retardation, aphasia, shuffling gait and adducted thumbs) syndrome, spastic paraplegia 1)] | L1CAM[L1 cell adhesion molecule (hydrocephalus, stenosis of aqueduct of Sylvius 1, MASA (mental retardation, aphasia, shuffling gait and adducted thumbs) syndrome, spastic paraplegia 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AGATCCAGCT (9) 1.6 0.0016 Cb medulloblastoma AGGAGGAAGA (14) 2.3 0.0023 Cb medulloblastoma GGCCAGAATG (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GAAGACTTGA (2) 5.7 0.0057 P8 GC+1d culture AGATCCAGCT (9) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAAGACTTGA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGATCCAGCT (9) 1.2 0.0012 P8 GC+SHH+1d culture GGCCAGAATG (3) 1.2 0.0012 3T3 fibroblasts AGATCCAGCT (9) 3.5 0.0035 E15 cortex AGATCCAGCT (9) 14.8 0.0148 E15 cortex AGGAGGAAGA (14) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GAAGACTTGA (2) 13.6 0.0136 P1 cortex AGGAGGAAGA (14) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AGATCCAGCT (9) 1.8 0.0018 Hypothalamus GAAGACTTGA (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina AGATCCAGCT (9) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GGCCAGAATG (3) 3.6 0.0036 E16.5 retina AGATCCAGCT (9) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina AGGAGGAAGA (14) 1.8 0.0018 E18.5 retina GGCCAGAATG (3) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina AGATCCAGCT (9) 3.9 0.0039 P0.5 retina GAAGACTTGA (2) 3.9 0.0039 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GAAGACTTGA (2) 3.5 0.0035 P2.5 retina AGATCCAGCT (9) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GGCCAGAATG (3) 4 0.004 P4.5 retina AGATCCAGCT (9) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGATCCAGCT (9) 5 0.005 P6.5 retina GGCCAGAATG (3) 3.3 0.0033 P6.5 retina AGGAGGAAGA (14) 1.7 0.0017 P6.5 retina GAAGACTTGA (2) 1.7 0.0017 P10.5 crx- retina AGATCCAGCT (9) 5.6 0.0056 P10.5 crx- retina AGGAGGAAGA (14) 1.9 0.0019 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AGATCCAGCT (9) 1.9 0.0019 Adult retinal AGATCCAGCT (9) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GAAGACTTGA (2) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AGATCCAGCT (9) 1.9 0.0019 ONL AGGAGGAAGA (14) 1.9 0.0019 ONL GAAGACTTGA (2) 1.9 0.0019