Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260594
2010313D22Rik
RIKEN cDNA 2010313D22 gene
5
67021
Mm.260594
2510002A14Rik
RIKEN cDNA 2510002A14 gene
5
5 C3.2
72313
Human Homolog
KIAA0826[KIAA0826]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCCCCGACA
(
3
)
1.6
0.0016
Cb medulloblastoma
GCCCCCGACA
(
3
)
11.6
0.0116
P8 GC+1d culture
GCCCCCGACA
(
3
)
9.1
0.0091
P8 GC+1d culture
ATGCCCGAGC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCCCCGACA
(
3
)
8.2
0.0082
P8 GC+SHH+1d culture
ATGCCCGAGC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TCCAAAGCTA
(
2
)
1.2
0.0012
3T3 fibroblasts
GCCCCCGACA
(
3
)
21
0.021
3T3 fibroblasts
ATGCCCGAGC
(
2
)
7
0.007
E15 cortex
GCCCCCGACA
(
3
)
9.9
0.0099
E15 cortex
CCATCTTCCA
(
2
)
4.9
0.0049
P1 cortex
GCCCCCGACA
(
3
)
4.5
0.0045
Hypothalamus
GCCCCCGACA
(
3
)
5.4
0.0054
Hypothalamus
ATGCCCGAGC
(
2
)
1.8
0.0018
Hypothalamus
CAATTTTTAT
(
2
)
1.8
0.0018
Hypothalamus
TCCAAAGCTA
(
2
)
1.8
0.0018
E12.5 retina
GCCCCCGACA
(
3
)
3.8
0.0038
E14.5 retina
GCCCCCGACA
(
3
)
1.8
0.0018
E16.5 retina
GCCCCCGACA
(
3
)
7.2
0.0072
E16.5 retina
ATGCCCGAGC
(
2
)
1.8
0.0018
E16.5 retina
CCATCTTCCA
(
2
)
1.8
0.0018
E16.5 retina
TCCAAAGCTA
(
2
)
1.8
0.0018
E18.5 retina
GCCCCCGACA
(
3
)
3.6
0.0036
E18.5 retina
ATGCCCGAGC
(
2
)
1.8
0.0018
E18.5 retina
CAATTTTTAT
(
2
)
1.8
0.0018
P0.5 retina
GCCCCCGACA
(
3
)
3.9
0.0039
P0.5 retina
ATGCCCGAGC
(
2
)
2
0.002
P2.5 retina
GCCCCCGACA
(
3
)
15.8
0.0158
P4.5 retina
GCCCCCGACA
(
3
)
9.9
0.0099
P6.5 retina
GCCCCCGACA
(
3
)
20
0.02
P10.5 crx- retina
GCCCCCGACA
(
3
)
16.7
0.0167
P10.5 crx- retina
ATGCCCGAGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCCCCCGACA
(
3
)
13.5
0.0135
P10.5 crx+ retina
CCATCTTCCA
(
2
)
1.9
0.0019
Adult retinal
GCCCCCGACA
(
3
)
24.1
0.0241
Adult retinal
ATGCCCGAGC
(
2
)
3.7
0.0037
Adult retinal
CAATTTTTAT
(
2
)
1.9
0.0019
ONL
GCCCCCGACA
(
3
)
9.6
0.0096
