Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260601	C530050O22Rik	RIKEN cDNA C530050O22 gene	4		242521
Human Homolog	KLHL9[kelch-like 9 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC AGAAAAAAAA (47) 17.9 0.0179 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 P8 Cb GC GAAAAAAAAC (8) 1.6 0.0016 P8 Cb GC GGAAAAAAAG (8) 1.6 0.0016 P8 Cb GC TAATTCTCAG (2) 1.6 0.0016 P8 Cb GC TCAAAAAAAG (4) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma AGAAAAAAAA (47) 53.2 0.0532 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma GAAAAAAAAC (8) 2.3 0.0023 Cb medulloblastoma TAACACCACA (3) 2.3 0.0023 Cb medulloblastoma TAATTCTCAG (2) 2.3 0.0023 Cb medulloblastoma TTGAATAAAA (4) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture AGAAAAAAAA (47) 8 0.008 P8 GC+1d culture CCCTATTAAG 3.4 0.0034 P8 GC+1d culture ATTTCTGCAT (2) 2.3 0.0023 P8 GC+1d culture CCTATTATGT (2) 2.3 0.0023 P8 GC+1d culture TAATTCTCAG (2) 2.3 0.0023 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAC (8) 1.1 0.0011 P8 GC+1d culture TCAAAAAAAG (4) 1.1 0.0011 P8 GC+1d culture TTGAATAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture AGAAAAAAAA (47) 14.1 0.0141 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture CCCTATTAAG 2.3 0.0023 P8 GC+SHH+1d culture CCTATTATGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGAAAAAAGA (7) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAAAC (8) 1.2 0.0012 P8 GC+SHH+1d culture TAATTCTCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAAAAAAAG (4) 1.2 0.0012 3T3 fibroblasts CCCTATTAAG 7 0.007 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts AGAAAAAAAA (47) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex AGAAAAAAAA (47) 14.8 0.0148 E15 cortex CCCTATTAAG 4.9 0.0049 E15 cortex TAATTCTCAG (2) 4.9 0.0049 E15 cortex TGAAAAAAGA (7) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 P1 cortex CCCTATTAAG 18.2 0.0182 P1 cortex AGAAAAAAAA (47) 9.1 0.0091 P1 cortex GATGCTCCTC (2) 4.5 0.0045 P1 cortex TAATTCTCAG (2) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus AGAAAAAAAA (47) 32.6 0.0326 Hypothalamus ATTTCTGCAT (2) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 Hypothalamus TTGAATAAAA (4) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina AGAAAAAAAA (47) 20.7 0.0207 E12.5 retina ATTTCTGCAT (2) 5.6 0.0056 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina CCTATTATGT (2) 1.9 0.0019 E12.5 retina TAATTCTCAG (2) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina AGAAAAAAAA (47) 20 0.02 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina TAATTCTCAG (2) 3.6 0.0036 E14.5 retina TTGAATAAAA (4) 3.6 0.0036 E14.5 retina CCCTATTAAG 1.8 0.0018 E14.5 retina TCAAAAAAAG (4) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina AGAAAAAAAA (47) 10.9 0.0109 E16.5 retina GATGCTCCTC (2) 3.6 0.0036 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina AGAAAAAAAA (47) 29.1 0.0291 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina CCCTATTAAG 1.8 0.0018 E18.5 retina TAATTCTCAG (2) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina AGAAAAAAAA (47) 13.7 0.0137 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina ATTTCTGCAT (2) 2 0.002 P0.5 retina CCTATTATGT (2) 2 0.002 P0.5 retina GAAAAAAAAC (8) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina AGAAAAAAAA (47) 17.6 0.0176 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina GGAAAAAAAG (8) 5.3 0.0053 P2.5 retina GATGCTCCTC (2) 3.5 0.0035 P2.5 retina ATTTCTGCAT (2) 1.8 0.0018 P2.5 retina GAAAAAAAAC (8) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina AGAAAAAAAA (47) 31.7 0.0317 P4.5 retina ATTTCTGCAT (2) 5.9 0.0059 P4.5 retina CCTATTATGT (2) 4 0.004 P4.5 retina TGGAAAAAAA (27) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina AGAAAAAAAA (47) 13.3 0.0133 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina GATGCTCCTC (2) 3.3 0.0033 P6.5 retina CCTATTATGT (2) 1.7 0.0017 P6.5 retina GAAAAAAAAC (8) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina AGAAAAAAAA (47) 7.4 0.0074 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx- retina ATTTCTGCAT (2) 1.9 0.0019 P10.5 crx- retina CCCTATTAAG 1.9 0.0019 P10.5 crx- retina GATGCTCCTC (2) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TAACACCACA (3) 7.7 0.0077 P10.5 crx+ retina AGAAAAAAAA (47) 5.8 0.0058 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina GAAAAAAAAC (8) 3.8 0.0038 P10.5 crx+ retina ATTTCTGCAT (2) 1.9 0.0019 P10.5 crx+ retina CCTATTATGT (2) 1.9 0.0019 Adult retinal GATGCTCCTC (2) 14.8 0.0148 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal CCCTATTAAG 9.3 0.0093 Adult retinal AGAAAAAAAA (47) 5.6 0.0056 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal ATTTCTGCAT (2) 1.9 0.0019 ONL AGAAAAAAAA (47) 19.2 0.0192 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TAATTCTCAG (2) 3.8 0.0038 ONL CCCTATTAAG 1.9 0.0019