Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260647	A130089M23Rik	RIKEN cDNA A130089M23 gene	15		106089
Mm.260647	D030063F01Rik	RIKEN cDNA D030063F01 gene	15		320269
Mm.260647	C920006C10Rik	RIKEN cDNA C920006C10 gene	15		76740
Human Homolog	KIAA0143[KIAA0143 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTAAAA (13) 4.9 0.0049 P8 Cb GC TCAAAAATAA (4) 1.6 0.0016 P8 Cb GC TTTTTACCTT (5) 1.6 0.0016 Cb medulloblastoma ATTTTTAAAA (13) 11.6 0.0116 Cb medulloblastoma CTAGGGACAC (4) 6.9 0.0069 Cb medulloblastoma AAAACACACA (14) 4.6 0.0046 Cb medulloblastoma TATTACTGTA (6) 2.3 0.0023 Cb medulloblastoma TCAAAAATAA (4) 2.3 0.0023 P8 GC+1d culture ATTTTTAAAA (13) 14.8 0.0148 P8 GC+1d culture TCAAAAATAA (4) 6.8 0.0068 P8 GC+1d culture TTTTTACCTT (5) 6.8 0.0068 P8 GC+1d culture TATTACTGTA (6) 2.3 0.0023 P8 GC+1d culture AATAAATACT (3) 1.1 0.0011 P8 GC+1d culture TATAAACATT (5) 1.1 0.0011 P8 GC+1d culture TATATCTTGA (5) 1.1 0.0011 P8 GC+1d culture TGCAGTAAAT (8) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTTAAAA (13) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTACCTT (5) 5.9 0.0059 P8 GC+SHH+1d culture TCAAAAATAA (4) 3.5 0.0035 P8 GC+SHH+1d culture TATTACTGTA (6) 2.3 0.0023 P8 GC+SHH+1d culture AATATTTATT (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGTAAAT (8) 1.2 0.0012 3T3 fibroblasts CTAGGGACAC (4) 7 0.007 E15 cortex TCAAAAATAA (4) 4.9 0.0049 P1 cortex ATTTTTAAAA (13) 13.6 0.0136 P1 cortex TCAAAAATAA (4) 9.1 0.0091 P1 cortex AATAAATACT (3) 4.5 0.0045 P1 cortex TATTACTGTA (6) 4.5 0.0045 P1 cortex TTTTTACCTT (5) 4.5 0.0045 Hypothalamus ATTTTTAAAA (13) 16.3 0.0163 Hypothalamus TTTTTACCTT (5) 3.6 0.0036 Hypothalamus TATAAACATT (5) 1.8 0.0018 Hypothalamus TATTACTGGA (4) 1.8 0.0018 Hypothalamus TATTACTGTA (6) 1.8 0.0018 Hypothalamus TCAAAAATAA (4) 1.8 0.0018 Hypothalamus TGCAGTAAAT (8) 1.8 0.0018 E12.5 retina ATTTTTAAAA (13) 7.5 0.0075 E12.5 retina AATAAATACT (3) 1.9 0.0019 E14.5 retina AATATTTATT (6) 3.6 0.0036 E14.5 retina TATTACTGTA (6) 3.6 0.0036 E14.5 retina ATTTTTAAAA (13) 1.8 0.0018 E14.5 retina TATTACTGGA (4) 1.8 0.0018 E14.5 retina TCAAAAATAA (4) 1.8 0.0018 E16.5 retina TTTTTACCTT (5) 7.2 0.0072 E16.5 retina AAAACACACA (14) 1.8 0.0018 E16.5 retina TGCAGTAAAT (8) 1.8 0.0018 E18.5 retina ATTTTTAAAA (13) 7.3 0.0073 E18.5 retina TCAAAAATAA (4) 5.5 0.0055 E18.5 retina TATTACTGGA (4) 3.6 0.0036 P0.5 retina ATTTTTAAAA (13) 5.9 0.0059 P0.5 retina TATAAACATT (5) 3.9 0.0039 P0.5 retina CTAGGGACAC (4) 2 0.002 P0.5 retina TATATCTTGA (5) 2 0.002 P0.5 retina TATTACTGTA (6) 2 0.002 P0.5 retina TGCAGTACAA (4) 2 0.002 P0.5 retina TTTTTACCTT (5) 2 0.002 P2.5 retina TTTTTACCTT (5) 8.8 0.0088 P2.5 retina ATTTTTAAAA (13) 3.5 0.0035 P2.5 retina CTAGGGACAC (4) 3.5 0.0035 P2.5 retina TATTACTGTA (6) 3.5 0.0035 P2.5 retina TGCAGTAAAT (8) 3.5 0.0035 P2.5 retina TCAAAAATAA (4) 1.8 0.0018 P4.5 retina TCAAAAATAA (4) 4 0.004 P4.5 retina AATAAATACT (3) 2 0.002 P4.5 retina ATTTTTAAAA (13) 2 0.002 P4.5 retina CTAGGGACAC (4) 2 0.002 P4.5 retina TATATCTTGA (5) 2 0.002 P4.5 retina TATTACTGTA (6) 2 0.002 P4.5 retina TTTTTACCTT (5) 2 0.002 P6.5 retina ATTTTTAAAA (13) 8.3 0.0083 P6.5 retina TTTTTACCTT (5) 5 0.005 P6.5 retina TCAAAAATAA (4) 3.3 0.0033 P6.5 retina TATTACTGTA (6) 1.7 0.0017 P6.5 retina TGCAGTACAA (4) 1.7 0.0017 P10.5 crx- retina TTTTTACCTT (5) 18.6 0.0186 P10.5 crx- retina ATTTTTAAAA (13) 5.6 0.0056 P10.5 crx- retina TATTACTGTA (6) 3.7 0.0037 P10.5 crx- retina CTAGGGACAC (4) 1.9 0.0019 P10.5 crx- retina TATTACTGGA (4) 1.9 0.0019 P10.5 crx- retina TCAAAAATAA (4) 1.9 0.0019 P10.5 crx+ retina ATTTTTAAAA (13) 3.8 0.0038 P10.5 crx+ retina CTAGGGACAC (4) 1.9 0.0019 P10.5 crx+ retina TATTACTGTA (6) 1.9 0.0019 P10.5 crx+ retina TTTTTACCTT (5) 1.9 0.0019 Adult retinal ATTTTTAAAA (13) 9.3 0.0093 Adult retinal CTAGGGACAC (4) 3.7 0.0037 Adult retinal TCAAAAATAA (4) 1.9 0.0019 Adult retinal TGCAGTACAA (4) 1.9 0.0019 Adult retinal TTTTTACCTT (5) 1.9 0.0019 ONL ATTTTTAAAA (13) 9.6 0.0096 ONL TATTACTGTA (6) 3.8 0.0038 ONL AATATTTATT (6) 1.9 0.0019 ONL CTAGGGACAC (4) 1.9 0.0019