Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260703	Vps26	vacuolar protein sorting 26 (yeast)	10		30930
Gene Ontology	intracellular protein transport | protein transport | transport
Human Homolog	VPS26[vacuolar protein sorting 26 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GAATTACAGC (4) 1.6 0.0016 P8 Cb GC TATAATCTAG (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCCGTCCTTA 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture ATATATAAAA (3) 6.8 0.0068 P8 GC+1d culture TATAATCTAG (2) 4.6 0.0046 P8 GC+1d culture CTAATGATTA (3) 1.1 0.0011 P8 GC+1d culture GAATTACAGC (4) 1.1 0.0011 P8 GC+1d culture TGTATGCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture ATATATAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TATAATCTAG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTAATGATTA (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts GAATTACAGC (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex ATATATAAAA (3) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GAATTACAGC (4) 3.6 0.0036 Hypothalamus ATATATAAAA (3) 1.8 0.0018 Hypothalamus TGTATGCAAA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GCCGTCCTTA 1.8 0.0018 E14.5 retina TATAATCTAG (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TATAATCTAG (2) 5.5 0.0055 E18.5 retina ATATATAAAA (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TATAATCTAG (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ATATATAAAA (3) 1.8 0.0018 P2.5 retina CTAATGATTA (3) 1.8 0.0018 P2.5 retina GAATTACAGC (4) 1.8 0.0018 P2.5 retina TGTATGCAAA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina AAATACCTGA (17) 8.3 0.0083 P6.5 retina CTAATGATTA (3) 3.3 0.0033 P10.5 crx- retina AAATACCTGA (17) 48.3 0.0483 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina AAATACCTGA (17) 21.1 0.0211 P10.5 crx+ retina CTAATGATTA (3) 1.9 0.0019 P10.5 crx+ retina GCCGTCCTTA 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal AAATACCTGA (17) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL AAATACCTGA (17) 15.3 0.0153