Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260733	Lphn1	latrophilin 1	8	8 C2	330814
Gene Ontology	G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | membrane | neuropeptide signaling pathway | sugar binding
Human Homolog	LPHN1[latrophilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTACAGTTCC (3) 4.9 0.0049 P8 Cb GC TTTGGGGCTG (6) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GCGAAGGCCA (2) 1.6 0.0016 P8 Cb GC GGGGGGAGGG (17) 1.6 0.0016 Cb medulloblastoma TTTGGGGCTG (6) 18.5 0.0185 Cb medulloblastoma TGCCCAGTGC (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTGGGGCTG (6) 17.1 0.0171 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTACAGTTCC (3) 3.4 0.0034 P8 GC+1d culture TCAGAGACCT (6) 2.3 0.0023 P8 GC+1d culture GCAGGTCCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTGGGGCTG (6) 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTACAGTTCC (3) 2.3 0.0023 P8 GC+SHH+1d culture TCAGAGACCT (6) 2.3 0.0023 P8 GC+SHH+1d culture AACTCATTTG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCAGGTCCCC (2) 1.2 0.0012 3T3 fibroblasts TTTGGGGCTG (6) 14 0.014 E15 cortex CTACAGTTCC (3) 9.9 0.0099 E15 cortex TTTGGGGCTG (6) 9.9 0.0099 E15 cortex GCAGGTCCCC (2) 4.9 0.0049 E15 cortex TGCCCAGTGC (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TGCCCAGTGC (3) 40.9 0.0409 P1 cortex TTTGGGGCTG (6) 13.6 0.0136 P1 cortex CTACAGTTCC (3) 9.1 0.0091 P1 cortex CCTGGCTCAC (7) 4.5 0.0045 P1 cortex GCAGGTCCCC (2) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TGCCCAGTGC (3) 14.5 0.0145 Hypothalamus TTTGGGGCTG (6) 14.5 0.0145 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GCAGGTCCCC (2) 3.6 0.0036 Hypothalamus CTGGGCTACT (4) 1.8 0.0018 Hypothalamus TCAGAGACCT (6) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TTTGGGGCTG (6) 3.8 0.0038 E12.5 retina AGATCCATCA (2) 1.9 0.0019 E12.5 retina GCAGGTCCCC (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TGCCCAGTGC (3) 5.5 0.0055 E14.5 retina TTTGGGGCTG (6) 3.6 0.0036 E14.5 retina CTACAGTTCC (3) 1.8 0.0018 E14.5 retina TCAGAGACCT (6) 1.8 0.0018 E16.5 retina TGCCCAGTGC (3) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AACTCATTTG (4) 1.8 0.0018 E16.5 retina TTTGGGGCTG (6) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGCCCAGTGC (3) 7.3 0.0073 E18.5 retina TTTGGGGCTG (6) 3.6 0.0036 E18.5 retina GGGGGGAGGG (17) 1.8 0.0018 P0.5 retina TTTGGGGCTG (6) 17.7 0.0177 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina AGATCCATCA (2) 3.9 0.0039 P0.5 retina TGCCCAGTGC (3) 3.9 0.0039 P0.5 retina AACTCATTTG (4) 2 0.002 P0.5 retina CTACAGTTCC (3) 2 0.002 P0.5 retina GCAGGTCCCC (2) 2 0.002 P0.5 retina GCGAAGGCCA (2) 2 0.002 P0.5 retina GGTGCAGAGG (10) 2 0.002 P2.5 retina TGCCCAGTGC (3) 8.8 0.0088 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCAGGTCCCC (2) 3.5 0.0035 P2.5 retina TTTGGGGCTG (6) 3.5 0.0035 P2.5 retina CTGGGCTACT (4) 1.8 0.0018 P2.5 retina GCGAAGGCCA (2) 1.8 0.0018 P2.5 retina GGGGGGAGGG (17) 1.8 0.0018 P2.5 retina GGTGCAGAGG (10) 1.8 0.0018 P2.5 retina TCAGAGACCT (6) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TGCCCAGTGC (3) 7.9 0.0079 P4.5 retina TTTGGGGCTG (6) 7.9 0.0079 P4.5 retina CTGGGCTACT (4) 2 0.002 P4.5 retina GCAGGTCCCC (2) 2 0.002 P4.5 retina GGGGGGAGGG (17) 2 0.002 P4.5 retina GGTGCAGAGG (10) 2 0.002 P4.5 retina TCAGAGACCT (6) 2 0.002 P6.5 retina TTTGGGGCTG (6) 11.7 0.0117 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GCAGGTCCCC (2) 5 0.005 P6.5 retina TGCCCAGTGC (3) 5 0.005 P6.5 retina AACTCATTTG (4) 1.7 0.0017 P6.5 retina CTACAGTTCC (3) 1.7 0.0017 P6.5 retina CTGGGCTACT (4) 1.7 0.0017 P6.5 retina TCAGAGACCT (6) 1.7 0.0017 P10.5 crx- retina TTTGGGGCTG (6) 63.2 0.0632 P10.5 crx- retina TGCCCAGTGC (3) 9.3 0.0093 P10.5 crx- retina AACTCATTTG (4) 3.7 0.0037 P10.5 crx- retina CTGGGCTACT (4) 1.9 0.0019 P10.5 crx+ retina TGCCCAGTGC (3) 15.4 0.0154 P10.5 crx+ retina TTTGGGGCTG (6) 15.4 0.0154 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GGGGGGAGGG (17) 1.9 0.0019 Adult retinal TTTGGGGCTG (6) 31.5 0.0315 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal TGCCCAGTGC (3) 5.6 0.0056 Adult retinal CCTGGCTCAC (7) 3.7 0.0037 Adult retinal CTGGGCTACT (4) 3.7 0.0037 Adult retinal CTACAGTTCC (3) 1.9 0.0019 Adult retinal GCAGGTCCCC (2) 1.9 0.0019 Adult retinal GCGAAGGCCA (2) 1.9 0.0019 ONL TTTGGGGCTG (6) 19.2 0.0192 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GGGGGGAGGG (17) 1.9 0.0019 ONL TCAGAGACCT (6) 1.9 0.0019