Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260904	Rps8	ribosomal protein S8	4		20116
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPS8[ribosomal protein S8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTAGTGTAA 145.2 0.1452 P8 Cb GC AGGCTCATTT (3) 8.2 0.0082 P8 Cb GC CATTCAACAA 1.6 0.0016 Cb medulloblastoma TGTAGTGTAA 57.8 0.0578 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma AGGAGGAAGA (14) 2.3 0.0023 Cb medulloblastoma AGGCTCATTT (3) 2.3 0.0023 Cb medulloblastoma TGTAATGTAA (3) 2.3 0.0023 P8 GC+1d culture TGTAGTGTAA 151.8 0.1518 P8 GC+1d culture AGGCTCATTT (3) 4.6 0.0046 P8 GC+1d culture TGTAGTGTAT (2) 2.3 0.0023 P8 GC+1d culture TGTAATGTAA (3) 1.1 0.0011 P8 GC+1d culture TGTAGTGTAC 1.1 0.0011 P8 GC+SHH+1d culture TGTAGTGTAA 211.9 0.2119 P8 GC+SHH+1d culture AGGCTCATTT (3) 8.2 0.0082 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture TGTAATGTAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGTAGTGTAC 1.2 0.0012 P8 GC+SHH+1d culture TGTAGTGTAG 1.2 0.0012 P8 GC+SHH+1d culture TGTAGTGTAT (2) 1.2 0.0012 3T3 fibroblasts TGTAGTGTAA 24.5 0.0245 3T3 fibroblasts AGGCTCATTT (3) 17.5 0.0175 E15 cortex TGTAGTGTAA 14.8 0.0148 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex AGGAGGAAGA (14) 4.9 0.0049 P1 cortex TGTAGTGTAA 86.4 0.0864 P1 cortex AGGAGGAAGA (14) 4.5 0.0045 Hypothalamus TGTAGTGTAA 168.4 0.1684 Hypothalamus AGGCTCATTT (3) 14.5 0.0145 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 E12.5 retina TGTAGTGTAA 433.7 0.4337 E12.5 retina AGGCTCATTT (3) 16.9 0.0169 E12.5 retina TGTAATGTAA (3) 3.8 0.0038 E12.5 retina TGTAGTGTAG 1.9 0.0019 E14.5 retina TGTAGTGTAA 297 0.297 E14.5 retina AGGCTCATTT (3) 9.1 0.0091 E14.5 retina TGTAATGTAA (3) 5.5 0.0055 E14.5 retina CATTCAACAA 1.8 0.0018 E16.5 retina TGTAGTGTAA 315.1 0.3151 E16.5 retina AGGCTCATTT (3) 30.8 0.0308 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E18.5 retina TGTAGTGTAA 347.4 0.3474 E18.5 retina AGGCTCATTT (3) 16.4 0.0164 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina CTGCCAAAAA (2) 3.6 0.0036 E18.5 retina TGTAATGTAA (3) 3.6 0.0036 E18.5 retina AGGAGGAAGA (14) 1.8 0.0018 E18.5 retina CATTCAACAA 1.8 0.0018 E18.5 retina TGTAGTGTAC 1.8 0.0018 P0.5 retina TGTAGTGTAA 125.6 0.1256 P0.5 retina AGGCTCATTT (3) 13.7 0.0137 P2.5 retina TGTAGTGTAA 142.5 0.1425 P2.5 retina AGGCTCATTT (3) 12.3 0.0123 P2.5 retina TGTAATGTAA (3) 5.3 0.0053 P4.5 retina TGTAGTGTAA 182.3 0.1823 P4.5 retina AGGCTCATTT (3) 5.9 0.0059 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina TGTAGTGTAG 4 0.004 P4.5 retina TGTAATGTAA (3) 2 0.002 P6.5 retina TGTAGTGTAA 80 0.08 P6.5 retina AGGCTCATTT (3) 5 0.005 P6.5 retina AGGAGGAAGA (14) 1.7 0.0017 P6.5 retina TGTAATGTAA (3) 1.7 0.0017 P10.5 crx- retina TGTAGTGTAA 61.3 0.0613 P10.5 crx- retina AGGCTCATTT (3) 7.4 0.0074 P10.5 crx- retina TGTAATGTAA (3) 7.4 0.0074 P10.5 crx- retina AGGAGGAAGA (14) 1.9 0.0019 P10.5 crx+ retina TGTAGTGTAA 80.7 0.0807 P10.5 crx+ retina AGGCTCATTT (3) 3.8 0.0038 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina CTGCCAAAAA (2) 1.9 0.0019 P10.5 crx+ retina TGTAATGTAA (3) 1.9 0.0019 Adult retinal TGTAGTGTAA 51.8 0.0518 Adult retinal AGGCTCATTT (3) 1.9 0.0019 ONL TGTAGTGTAA 46 0.046 ONL AGGAGGAAGA (14) 1.9 0.0019 ONL TGTAATGTAA (3) 1.9 0.0019