| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAGAATAAT (3)
| 3.3 | 0.0033 |
| Cb medulloblastoma | GAAGAATAAT (3)
| 16.2 | 0.0162 |
| P8 GC+1d culture | GAAGAATAAT (3)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | GAAGAATAAT (3) GAGAATGCCA (3)
| 9.4 | 0.0094 |
| Hypothalamus | GAAGAATAAT (3)
| 12.7 | 0.0127 |
| E12.5 retina | AAGGGCATCC (3) GAAGAATAAT (3)
| 9.4 | 0.0094 |
| E14.5 retina | AAGGGCATCC (3) GAAGAATAAT (3) GAGAATGCCA (3)
| 7.2 | 0.0072 |
| E16.5 retina | CCTGGGCCAG (3) GAAGAATAAT (3)
| 7.2 | 0.0072 |
| E18.5 retina | AAGGGCATCC (3) GAAGAATAAT (3)
| 16.4 | 0.0164 |
| P0.5 retina | AAGGGCATCC (3) GAAGAATAAT (3) GAGAATGCCA (3)
| 7.9 | 0.0079 |
| P2.5 retina | CCTGGGCCAG (3) GAAGAATAAT (3)
| 21.1 | 0.0211 |
| P4.5 retina | GAAGAATAAT (3)
| 7.9 | 0.0079 |
| P6.5 retina | CCTGGGCCAG (3) GAAGAATAAT (3)
| 3.4 | 0.0034 |
| P10.5 crx- retina | CCTGGGCCAG (3)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | CCTGGGCCAG (3) GAAGAATAAT (3)
| 9.6 | 0.0096 |
| Adult retinal | AAGGGCATCC (3)
| 1.9 | 0.0019 |
| ONL | GAAGAATAAT (3)
| 1.9 | 0.0019 |