Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261218	Rnf3	ring finger protein 3	5		69587
Human Homolog	RNF3[ring finger protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCGATTCT CCATCCAGTG CGTTTATTAG GTAAATATTT (2) GTGAAACCAA TAATAAATAA (2) TGGTTGCTGA (3) 30.9 0.0309 Cb medulloblastoma AGACCCCATC GTAATATTTA (2) TAATAAATAA (2) TGGTTGCTGA (3) 16.1 0.0161 P8 GC+1d culture CAGCGATTCT CCATCCAGTG CGTTTATTAG GTAATATTTA (2) GTCTCACACC GTGAAACCAA TAATAAATAA (2) 46.7 0.0467 P8 GC+SHH+1d culture AGAACAAAAG (2) AGACCCCATC CAGCGATTCT CCATCCAGTG GTCTCACACC GTGAAACCAA TAATAAATAA (2) TGGTTGCTGA (3) 46.9 0.0469 3T3 fibroblasts CCATCCAGTG TGGTTGCTGA (3) 14 0.014 E15 cortex TGGTTGCTGA (3) 4.9 0.0049 P1 cortex GTCTCACACC 4.5 0.0045 Hypothalamus CAGCGATTCT GTAAATATTT (2) TAATAAATAA (2) TGGTTGCTGA (3) 48.9 0.0489 E12.5 retina AGACCCCATC CAGCGATTCT CGTTTATTAG TAATAAATAA (2) TGGTTGCTGA (3) 54.5 0.0545 E14.5 retina AGAACAAAAG (2) CAGCGATTCT GTAATATTTA (2) GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 98.3 0.0983 E16.5 retina AAAACAAAAG (4) CAGCGATTCT GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 74.2 0.0742 E18.5 retina CAGCGATTCT GTAATATTTA (2) GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 101.8 0.1018 P0.5 retina AGACCCCATC CAGCGATTCT GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 45.2 0.0452 P2.5 retina AGACCCCATC CAGCGATTCT GTAATATTTA (2) GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 86.4 0.0864 P4.5 retina CAGCGATTCT CCATCCAGTG CGTTTATTAG GTAAATATTT (2) GTCTCACACC GTGAAACCAA TAATAAATAA (2) TGGTTGCTGA (3) 101.2 0.1012 P6.5 retina AGAACAAAAG (2) GTAAATATTT (2) GTAATATTTA (2) TAATAAATAA (2) TGGTTGCTGA (3) 85 0.085 P10.5 crx- retina AAAACAAAAG (4) AGAACAAAAG (2) AGACCCCATC GTCTCACACC TAATAAATAA (2) TGGTTGCTGA (3) 22.4 0.0224 P10.5 crx+ retina AGACCCCATC CGTTTATTAG GTGAAACCAA TAATAAATAA (2) TGGTTGCTGA (3) 26.8 0.0268 Adult retinal AGACCCCATC CCATCCAGTG GTAATATTTA (2) TAATAAATAA (2) TGGTTGCTGA (3) 13.2 0.0132 ONL AAAACAAAAG (4) AGACCCCATC TAATAAATAA (2) TGGTTGCTGA (3) 38.3 0.0383