Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26134
AA516602
expressed sequence AA516602
18
106851
Mm.26134
AU018728
expressed sequence AU018728
18
106981
Mm.26134
2900026H06Rik
RIKEN cDNA 2900026H06 gene
18
72930
Mm.26134
E130009M08Rik
RIKEN cDNA E130009M08 gene
18
319540
Mm.26134
4933407I08Rik
RIKEN cDNA 4933407I08 gene
18
71009
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCACTTCCT (
7
)
4.9
0.0049
P8 Cb GC
ATTTAATAAA (
11
)
1.6
0.0016
Cb medulloblastoma
ATTTAATAAA (
11
)
4.6
0.0046
Cb medulloblastoma
GAAGGAGGAA (
10
)
2.3
0.0023
Cb medulloblastoma
GCCACTTCCT (
7
)
2.3
0.0023
P8 GC+1d culture
ACAGGCTCCT
(
5
)
10.3
0.0103
P8 GC+1d culture
GCCACTTCCT (
7
)
8
0.008
P8 GC+1d culture
CTCCTTAGAG
(
6
)
4.6
0.0046
P8 GC+1d culture
ATTTAATAAA (
11
)
2.3
0.0023
P8 GC+1d culture
GAAGGAGGAA (
10
)
1.1
0.0011
P8 GC+1d culture
GCGCTGGCCG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCACTTCCT (
7
)
8.2
0.0082
P8 GC+SHH+1d culture
ACAGGCTCCT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CTCCTTAGAG
(
6
)
1.2
0.0012
3T3 fibroblasts
GCGCTGGCCG (
7
)
3.5
0.0035
E15 cortex
AACCCGAGTT
(
5
)
14.8
0.0148
E15 cortex
GCCACTTCCT (
7
)
4.9
0.0049
P1 cortex
ACAGGCTCCT
(
5
)
13.6
0.0136
P1 cortex
ATTTAATAAA (
11
)
4.5
0.0045
P1 cortex
TCTGCTGATG
(
9
)
4.5
0.0045
Hypothalamus
ATTTAATAAA (
11
)
1.8
0.0018
Hypothalamus
CTCCTTAGAG
(
6
)
1.8
0.0018
Hypothalamus
GCCACTTCCT (
7
)
1.8
0.0018
E12.5 retina
GCCACTTCCT (
7
)
9.4
0.0094
E12.5 retina
CTCCTTAGAG
(
6
)
3.8
0.0038
E12.5 retina
GAAGGAGGAA (
10
)
1.9
0.0019
E12.5 retina
TCTGCTGATG
(
9
)
1.9
0.0019
E14.5 retina
GCCACTTCCT (
7
)
3.6
0.0036
E14.5 retina
ATTTAATAAA (
11
)
1.8
0.0018
E16.5 retina
GCCACTTCCT (
7
)
3.6
0.0036
E16.5 retina
ATTTAATAAA (
11
)
1.8
0.0018
E16.5 retina
GAAGGAGGAA (
10
)
1.8
0.0018
E18.5 retina
ACAGGCTCCT
(
5
)
1.8
0.0018
E18.5 retina
GCCACTTCCT (
7
)
1.8
0.0018
P0.5 retina
CTCCTTAGAG
(
6
)
2
0.002
P0.5 retina
GCGCTGGCCG (
7
)
2
0.002
P2.5 retina
ATTTAATAAA (
11
)
7
0.007
P2.5 retina
GCCACTTCCT (
7
)
5.3
0.0053
P2.5 retina
CTCCTTAGAG
(
6
)
1.8
0.0018
P2.5 retina
GAAGGAGGAA (
10
)
1.8
0.0018
P4.5 retina
ATTTAATAAA (
11
)
5.9
0.0059
P4.5 retina
CTCCTTAGAG
(
6
)
5.9
0.0059
P4.5 retina
ACAGGCTCCT
(
5
)
4
0.004
P4.5 retina
GAAGGAGGAA (
10
)
2
0.002
P4.5 retina
GCCACTTCCT (
7
)
2
0.002
P4.5 retina
TCTGCTGATG
(
9
)
2
0.002
P6.5 retina
ACAGGCTCCT
(
5
)
8.3
0.0083
P6.5 retina
CTCCTTAGAG
(
6
)
3.3
0.0033
P6.5 retina
ATTTAATAAA (
11
)
1.7
0.0017
P6.5 retina
GAAGGAGGAA (
10
)
1.7
0.0017
P10.5 crx- retina
ACAGGCTCCT
(
5
)
9.3
0.0093
P10.5 crx- retina
GCCACTTCCT (
7
)
3.7
0.0037
P10.5 crx- retina
ATTTAATAAA (
11
)
1.9
0.0019
P10.5 crx- retina
CTCCTTAGAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
ATTTAATAAA (
11
)
1.9
0.0019
P10.5 crx+ retina
CTCCTTAGAG
(
6
)
1.9
0.0019
Adult retinal
ACAGGCTCCT
(
5
)
5.6
0.0056
Adult retinal
GAAGGAGGAA (
10
)
1.9
0.0019
ONL
ATTTAATAAA (
11
)
7.7
0.0077
ONL
ACAGGCTCCT
(
5
)
3.8
0.0038
ONL
CTCCTTAGAG
(
6
)
1.9
0.0019
