Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261491
Rhot1
ras homolog gene family, member T1
11
11 47.26 cM
59040
Mm.261491
C430039G08Rik
RIKEN cDNA C430039G08 gene
11
77600
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGTGTTCTG
(
4
)
1.6
0.0016
P8 Cb GC
TATCAAATAA
(
2
)
1.6
0.0016
Cb medulloblastoma
ATGTGTTCTG
(
4
)
6.9
0.0069
P8 GC+1d culture
CCTCCCCCTC (
2
)
8
0.008
P8 GC+1d culture
ATGTGTTCTG
(
4
)
3.4
0.0034
P8 GC+1d culture
ATGACTCACA (
3
)
1.1
0.0011
P8 GC+1d culture
TATCAAATAA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTCCCCCTC (
2
)
3.5
0.0035
P8 GC+SHH+1d culture
ATGTGTTCTG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGCTACGGC
(
7
)
1.2
0.0012
3T3 fibroblasts
CCTCCCCCTC (
2
)
7
0.007
3T3 fibroblasts
ATGACTCACA (
3
)
3.5
0.0035
3T3 fibroblasts
ATGTGTTCTG
(
4
)
3.5
0.0035
E15 cortex
CCTCCCCCTC (
2
)
4.9
0.0049
E12.5 retina
ATGACTCACA (
3
)
3.8
0.0038
E12.5 retina
ATGTGTTCTG
(
4
)
3.8
0.0038
E12.5 retina
CCTCCCCCTC (
2
)
3.8
0.0038
E14.5 retina
CCTCCCCCTC (
2
)
5.5
0.0055
E14.5 retina
ATGACTCACA (
3
)
3.6
0.0036
E14.5 retina
ATGTGTTCTG
(
4
)
1.8
0.0018
E14.5 retina
TATCAAATAA
(
2
)
1.8
0.0018
E16.5 retina
CCTCCCCCTC (
2
)
3.6
0.0036
E16.5 retina
AACAAAGACG
(
4
)
1.8
0.0018
E16.5 retina
ATGTGTTCTG
(
4
)
1.8
0.0018
E18.5 retina
CCTCCCCCTC (
2
)
7.3
0.0073
P0.5 retina
ATGTGTTCTG
(
4
)
9.8
0.0098
P0.5 retina
CCTCCCCCTC (
2
)
7.9
0.0079
P0.5 retina
AACAAAGACG
(
4
)
2
0.002
P0.5 retina
TATCAAATAA
(
2
)
2
0.002
P2.5 retina
CCTCCCCCTC (
2
)
3.5
0.0035
P2.5 retina
ATGACTCACA (
3
)
1.8
0.0018
P4.5 retina
ATGTGTTCTG
(
4
)
2
0.002
P4.5 retina
CAGCTACGGC
(
7
)
2
0.002
P4.5 retina
CCTCCCCCTC (
2
)
2
0.002
P6.5 retina
ATGTGTTCTG
(
4
)
5
0.005
P6.5 retina
CCTCCCCCTC (
2
)
5
0.005
P6.5 retina
TATCAAATAA
(
2
)
3.3
0.0033
P10.5 crx- retina
ATGTGTTCTG
(
4
)
3.7
0.0037
P10.5 crx- retina
AACAAAGACG
(
4
)
1.9
0.0019
P10.5 crx- retina
CCTCCCCCTC (
2
)
1.9
0.0019
P10.5 crx+ retina
ATGTGTTCTG
(
4
)
9.6
0.0096
P10.5 crx+ retina
CAGCTACGGC
(
7
)
3.8
0.0038
P10.5 crx+ retina
CCTCCCCCTC (
2
)
3.8
0.0038
P10.5 crx+ retina
TATCAAATAA
(
2
)
1.9
0.0019
Adult retinal
ATGTGTTCTG
(
4
)
14.8
0.0148
Adult retinal
CCTCCCCCTC (
2
)
3.7
0.0037
Adult retinal
AACAAAGACG
(
4
)
1.9
0.0019
Adult retinal
ATGGCTTTGA
(
4
)
1.9
0.0019
ONL
ATGTGTTCTG
(
4
)
11.5
0.0115
ONL
TATCAAATAA
(
2
)
7.7
0.0077
ONL
ATGACTCACA (
3
)
1.9
0.0019
ONL
ATGGCTTTGA
(
4
)
1.9
0.0019