| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTACAGCAGA (6)
| 6.5 | 0.0065 |
| Cb medulloblastoma | TTACAGCAGA (6)
| 9.2 | 0.0092 |
| P8 GC+1d culture | CCCAGAGCTT (5) CTGGATCCTT (5) TATAATTTGA (6) TTACAGCAGA (6)
| 21.6 | 0.0216 |
| P8 GC+SHH+1d culture | CCCAGAGCTT (5) TAAATATGCT (5) TTACAGCAGA (6)
| 8.3 | 0.0083 |
| 3T3 fibroblasts | CAGCGCGGGA (5)
| 10.5 | 0.0105 |
| E15 cortex | CAGCGCGGGA (5)
| 4.9 | 0.0049 |
| Hypothalamus | CTGGATCCTT (5) TGGGGCTGGG (5) TTACAGCAGA (6)
| 14.5 | 0.0145 |
| E12.5 retina | TTACAGCAGA (6)
| 3.8 | 0.0038 |
| E14.5 retina | TTACAGCAGA (6)
| 7.3 | 0.0073 |
| E16.5 retina | TTACAGCAGA (6)
| 14.5 | 0.0145 |
| E18.5 retina | TTACAGCAGA (6)
| 9.1 | 0.0091 |
| P0.5 retina | CTGGATCCTT (5) TTACAGCAGA (6)
| 5.9 | 0.0059 |
| P2.5 retina | CTGGATCCTT (5) TATAATTTGA (6) TTACAGCAGA (6)
| 10.6 | 0.0106 |
| P4.5 retina | CTGGATCCTT (5) TTACAGCAGA (6)
| 13.9 | 0.0139 |
| P6.5 retina | TAAATATGCT (5) TATAATTTGA (6) TTACAGCAGA (6)
| 5.1 | 0.0051 |
| P10.5 crx- retina | TATAATTTGA (6) TTACAGCAGA (6)
| 31.6 | 0.0316 |
| P10.5 crx+ retina | TAAATATGCT (5) TTACAGCAGA (6)
| 11.5 | 0.0115 |
| Adult retinal | CCCAGAGCTT (5) TTACAGCAGA (6)
| 13 | 0.013 |
| ONL | TGGGGCTGGG (5) TTACAGCAGA (6)
| 11.5 | 0.0115 |