| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CGCTCACCAA GGCACCTCGG GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TACAGAGGCC TTAAGAGGCC
| 244.7 | 0.2447 |
| Cb medulloblastoma | GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TAGAGAGGCC
| 80.9 | 0.0809 |
| P8 GC+1d culture | CAGGAGGAGG (2) GCCGCGGCCC GTGGGGCGGG (2) TAAAGAGCCC (2) TAAAGAGGCC TGCAGCCCAT
| 184.8 | 0.1848 |
| P8 GC+SHH+1d culture | GCCGCGGCCC GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TAGAGAGGCC TGCAGCCCAT
| 222.5 | 0.2225 |
| 3T3 fibroblasts | GCCGCGGCCC GGCTTTGGTG (2) TAAAGAGGCC TGCAGCCCAT
| 273.3 | 0.2733 |
| E15 cortex | GTGGGGCGGG (2) TAAAGAGCCC (2) TAAAGAGGCC TGCAGCCCAT
| 128.6 | 0.1286 |
| P1 cortex | TAAAGAGGCC TTAAGAGGCC
| 118.1 | 0.1181 |
| Hypothalamus | GCCGCGGCCC GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGCCC (2) TAAAGAGGCC TGCAGCCCAT
| 130.2 | 0.1302 |
| E12.5 retina | CAGGAGGAGG (2) GCCGCGGCCC GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TAGAGAGGCC
| 445 | 0.445 |
| E14.5 retina | GCCGCGGCCC GGCTTTGGTG (2) TAAAGAGGCC TGCAGCCCAT
| 256.8 | 0.2568 |
| E16.5 retina | GCCGCGGCCC GGCTTTGGTG (2) TAAAGAGGCC TGCAGCCCAT
| 240.9 | 0.2409 |
| E18.5 retina | GCCGCGGCCC GTGGGGCGGG (2) TAAAGAGCCC (2) TAAAGAGGCC TAAAGAGTCC TACAGAGGCC TAGAGAGGCC TGCAGCCCAT
| 314.6 | 0.3146 |
| P0.5 retina | GCCGCGGCCC GGCACCTCGG GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TTAAGAGGCC
| 218 | 0.218 |
| P2.5 retina | GCCGCGGCCC GTGGGGCGGG (2) TAAAGAGGCC TAGAGAGGCC TTAAGAGGCC
| 232.4 | 0.2324 |
| P4.5 retina | GCCGCGGCCC GGCACCTCGG GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TTAAGAGGCC
| 200.1 | 0.2001 |
| P6.5 retina | CAGGAGGAGG (2) GCCGCGGCCC GTGGGGCGGG (2) TAAAGAGGCC
| 135.1 | 0.1351 |
| P10.5 crx- retina | GGCTTTGGTG (2) TAAAGAGGCC
| 57.6 | 0.0576 |
| P10.5 crx+ retina | CAGGAGGAGG (2) GCCGCGGCCC GGCTTTGGTG (2) GTGGGGCGGG (2) TAAAGAGGCC TAGAGAGGCC
| 101.9 | 0.1019 |
| Adult retinal | CAGGAGGAGG (2) CGCTCACCAA TAAAGAGGCC
| 46.4 | 0.0464 |
| ONL | TAAAGAGGCC TACAGAGGCC TGCAGCCCAT
| 24.9 | 0.0249 |