Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261818
Rnf167
ring finger protein 167
11
11 B4
70510
Human Homolog
RNF167[ring finger protein 167]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 158 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCTGGGGGC
(
5
)
37.5
0.0375
P8 Cb GC
GTTTTCATTT
(
11
)
13.1
0.0131
P8 Cb GC
TGGGGCTGGC (
3
)
13.1
0.0131
P8 Cb GC
CACCCTGTGG (
2
)
8.2
0.0082
P8 Cb GC
ACTGCCAAGA
(
2
)
3.3
0.0033
P8 Cb GC
TCAAACATTT
(
3
)
1.6
0.0016
P8 Cb GC
TGGTTTTGGC
(
4
)
1.6
0.0016
Cb medulloblastoma
GGCTGGGGGC
(
5
)
30.1
0.0301
Cb medulloblastoma
TGGGGCTGGC (
3
)
23.1
0.0231
Cb medulloblastoma
TATGATGAGA (
2
)
4.6
0.0046
Cb medulloblastoma
CACCCTGTGG (
2
)
2.3
0.0023
Cb medulloblastoma
GGACTGGGGC (
10
)
2.3
0.0023
Cb medulloblastoma
GTGACAGTGA (
5
)
2.3
0.0023
Cb medulloblastoma
GTTTTCATTT
(
11
)
2.3
0.0023
P8 GC+1d culture
GGCTGGGGGC
(
5
)
35.4
0.0354
P8 GC+1d culture
TGGGGCTGGC (
3
)
20.5
0.0205
P8 GC+1d culture
CACCCTGTGG (
2
)
5.7
0.0057
P8 GC+1d culture
GTTTTCATTT
(
11
)
4.6
0.0046
P8 GC+1d culture
GTGTTGAAGA (
8
)
3.4
0.0034
P8 GC+1d culture
TCAAACATTT
(
3
)
3.4
0.0034
P8 GC+1d culture
GGACTGGGGC (
10
)
2.3
0.0023
P8 GC+1d culture
TATGATGAGA (
2
)
1.1
0.0011
P8 GC+1d culture
TGGTTTTGGC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCTGGGGGC
(
5
)
46.8
0.0468
P8 GC+SHH+1d culture
TGGGGCTGGC (
3
)
30.4
0.0304
P8 GC+SHH+1d culture
GTTTTCATTT
(
11
)
12.9
0.0129
P8 GC+SHH+1d culture
CACCCTGTGG (
2
)
9.4
0.0094
P8 GC+SHH+1d culture
GTGTTGAAGA (
8
)
4.7
0.0047
P8 GC+SHH+1d culture
GGACTGGGGC (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGGTGGGA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGACAGTGA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TCAAACATTT
(
3
)
1.2
0.0012
3T3 fibroblasts
GGCTGGGGGC
(
5
)
178.8
0.1788
3T3 fibroblasts
TGGGGCTGGC (
3
)
31.5
0.0315
3T3 fibroblasts
ACTGCCAAGA
(
2
)
10.5
0.0105
3T3 fibroblasts
GTGACAGTGA (
5
)
7
0.007
3T3 fibroblasts
TCAAACATTT
(
3
)
7
0.007
3T3 fibroblasts
GTTTTCATTT
(
11
)
3.5
0.0035
E15 cortex
GGCTGGGGGC
(
5
)
118.7
0.1187
E15 cortex
TGGGGCTGGC (
3
)
14.8
0.0148
E15 cortex
CACCCTGTGG (
2
)
9.9
0.0099
E15 cortex
ACTGCCAAGA
(
2
)
4.9
0.0049
P1 cortex
GGCTGGGGGC
(
5
)
31.8
0.0318
P1 cortex
TGGGGCTGGC (
3
)
22.7
0.0227
P1 cortex
ACTGCCAAGA
(
2
)
4.5
0.0045
P1 cortex
GGGGGTGGGA (
5
)
4.5
0.0045
P1 cortex
GTGTTGAAGA (
8
)
4.5
0.0045
Hypothalamus
TGGGGCTGGC (
3
)
25.4
0.0254
Hypothalamus
GTGACAGTGA (
5
)
10.9
0.0109
Hypothalamus
TATGATGAGA (
2
)
7.2
0.0072
Hypothalamus
CACCCTGTGG (
2
)
5.4
0.0054
Hypothalamus
ACTGCCAAGA
(
2
)
1.8
0.0018
Hypothalamus
CTTTATCACA
1.8
0.0018
Hypothalamus
GACTTTGGAG (
3
)
1.8
0.0018
Hypothalamus
GGCTGGGGGC
(
5
)
1.8
0.0018
Hypothalamus
GGGGGTGGGA (
5
)
1.8
0.0018
Hypothalamus
TCAAACATTT
(
3
)
1.8
0.0018
E12.5 retina
GGCTGGGGGC
(
5
)
56.3
0.0563
E12.5 retina
CACCCTGTGG (
2
)
9.4
0.0094
E12.5 retina
TGGGGCTGGC (
3
)
9.4
0.0094
E12.5 retina
GTGTTGAAGA (
8
)
3.8
0.0038
E12.5 retina
TATGATGAGA (
2
)
3.8
0.0038
E12.5 retina
GGGGGTGGGA (
5
)
1.9
0.0019
E12.5 retina
GTTTTCATTT
(
11
)
1.9
0.0019
E14.5 retina
TGGGGCTGGC (
3
)
10.9
0.0109
E14.5 retina
GTTTTCATTT
(
11
)
7.3
0.0073
E14.5 retina
CACCCTGTGG (
2
)
5.5
0.0055
E14.5 retina
GTGACAGTGA (
5
)
3.6
0.0036
E14.5 retina
TATGATGAGA (
2
)
3.6
0.0036
E14.5 retina
GTTTTGATTT (
6
)
1.8
0.0018
E16.5 retina
TGGGGCTGGC (
3
)
18.1
0.0181
E16.5 retina
GGCTGGGGGC
(
5
)
12.7
0.0127
E16.5 retina
CACCCTGTGG (
2
)
9.1
0.0091
E16.5 retina
GTTTTCATTT
(
11
)
7.2
0.0072
E16.5 retina
GTGACAGTGA (
5
)
3.6
0.0036
E16.5 retina
GACTTTGGAG (
3
)
1.8
0.0018
E16.5 retina
GGACTGGGGC (
10
)
1.8
0.0018
E16.5 retina
GTGTTGAAGA (
8
)
1.8
0.0018
E16.5 retina
TATGATGAGA (
2
)
1.8
0.0018
E16.5 retina
TCAAACATTT
(
3
)
1.8
0.0018
E16.5 retina
TGGTTTTGGC
(
4
)
1.8
0.0018
E18.5 retina
GGCTGGGGGC
(
5
)
38.2
0.0382
E18.5 retina
CACCCTGTGG (
2
)
5.5
0.0055
E18.5 retina
TGGGGCTGGC (
3
)
5.5
0.0055
E18.5 retina
CTTTATCACA
3.6
0.0036
E18.5 retina
GGACTGGGGC (
10
)
3.6
0.0036
E18.5 retina
GTTTTCATTT
(
11
)
3.6
0.0036
E18.5 retina
TATGATGAGA (
2
)
3.6
0.0036
E18.5 retina
GGGGGTGGGA (
5
)
1.8
0.0018
E18.5 retina
GTGTTGAAGA (
8
)
1.8
0.0018
P0.5 retina
GGCTGGGGGC
(
5
)
33.4
0.0334
P0.5 retina
TGGGGCTGGC (
3
)
15.7
0.0157
P0.5 retina
GTTTTCATTT
(
11
)
11.8
0.0118
P0.5 retina
GTGTTGAAGA (
8
)
7.9
0.0079
P0.5 retina
CACCCTGTGG (
2
)
3.9
0.0039
P0.5 retina
TCAAACATTT
(
3
)
3.9
0.0039
P0.5 retina
GACTTTGGAG (
3
)
2
0.002
P0.5 retina
GGACTGGGGC (
10
)
2
0.002
P0.5 retina
GTTTTGATTT (
6
)
2
0.002
P0.5 retina
TATGATGAGA (
2
)
2
0.002
P2.5 retina
GGCTGGGGGC
(
5
)
51
0.051
P2.5 retina
GTTTTCATTT
(
11
)
15.8
0.0158
P2.5 retina
CACCCTGTGG (
2
)
12.3
0.0123
P2.5 retina
TGGGGCTGGC (
3
)
10.6
0.0106
P2.5 retina
GGGGGTGGGA (
5
)
1.8
0.0018
P2.5 retina
GGTTTCATTT (
2
)
1.8
0.0018
P2.5 retina
GTGACAGTGA (
5
)
1.8
0.0018
P2.5 retina
GTGTTGAAGA (
8
)
1.8
0.0018
P2.5 retina
TGGTTTTGGC
(
4
)
1.8
0.0018
P4.5 retina
GGCTGGGGGC
(
5
)
27.7
0.0277
P4.5 retina
TGGGGCTGGC (
3
)
11.9
0.0119
P4.5 retina
GTTTTCATTT
(
11
)
9.9
0.0099
P4.5 retina
CACCCTGTGG (
2
)
7.9
0.0079
P4.5 retina
GGAACAGACT (
2
)
2
0.002
P4.5 retina
GGACTGGGGC (
10
)
2
0.002
P4.5 retina
GGGGGTGGGA (
5
)
2
0.002
P4.5 retina
GTGTTGAAGA (
8
)
2
0.002
P4.5 retina
TCAAACATTT
(
3
)
2
0.002
P6.5 retina
GGCTGGGGGC
(
5
)
25
0.025
P6.5 retina
CACCCTGTGG (
2
)
11.7
0.0117
P6.5 retina
GTTTTCATTT
(
11
)
11.7
0.0117
P6.5 retina
TGGGGCTGGC (
3
)
10
0.01
P6.5 retina
GTGTTGAAGA (
8
)
8.3
0.0083
P6.5 retina
GGGGGTGGGA (
5
)
6.7
0.0067
P6.5 retina
GGTTTCATTT (
2
)
1.7
0.0017
P6.5 retina
GTTTTGATTT (
6
)
1.7
0.0017
P6.5 retina
TATGATGAGA (
2
)
1.7
0.0017
P6.5 retina
TCAAACATTT
(
3
)
1.7
0.0017
P10.5 crx- retina
GTTTTCATTT
(
11
)
27.9
0.0279
P10.5 crx- retina
TGGGGCTGGC (
3
)
26
0.026
P10.5 crx- retina
TCAAACATTT
(
3
)
5.6
0.0056
P10.5 crx- retina
GGACTGGGGC (
10
)
3.7
0.0037
P10.5 crx- retina
GTGTTGAAGA (
8
)
3.7
0.0037
P10.5 crx- retina
GGAACAGACT (
2
)
1.9
0.0019
P10.5 crx- retina
GGCTGGGGGC
(
5
)
1.9
0.0019
P10.5 crx- retina
TGGTTTTGGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGCTGGGGGC
(
5
)
38.4
0.0384
P10.5 crx+ retina
TGGGGCTGGC (
3
)
38.4
0.0384
P10.5 crx+ retina
CACCCTGTGG (
2
)
5.8
0.0058
P10.5 crx+ retina
GTGTTGAAGA (
8
)
5.8
0.0058
P10.5 crx+ retina
GTTTTCATTT
(
11
)
5.8
0.0058
P10.5 crx+ retina
GTTTTGATTT (
6
)
1.9
0.0019
P10.5 crx+ retina
TGGTTTTGGC
(
4
)
1.9
0.0019
Adult retinal
TGGGGCTGGC (
3
)
18.5
0.0185
Adult retinal
GGCTGGGGGC
(
5
)
16.7
0.0167
Adult retinal
GTTTTCATTT
(
11
)
11.1
0.0111
Adult retinal
CACCCTGTGG (
2
)
7.4
0.0074
Adult retinal
GTGTTGAAGA (
8
)
5.6
0.0056
Adult retinal
GGTTTCATTT (
2
)
1.9
0.0019
Adult retinal
TATGATGAGA (
2
)
1.9
0.0019
ONL
GTGTTGAAGA (
8
)
15.3
0.0153
ONL
GGAACAGACT (
2
)
5.7
0.0057
ONL
GTTTTCATTT
(
11
)
5.7
0.0057
ONL
GGCTGGGGGC
(
5
)
3.8
0.0038
ONL
GGGGGTGGGA (
5
)
1.9
0.0019
ONL
TATGATGAGA (
2
)
1.9
0.0019
ONL
TCAAACATTT
(
3
)
1.9
0.0019
ONL
TGGGGCTGGC (
3
)
1.9
0.0019
