Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262039	1110053K06Rik	RIKEN cDNA 1110053K06 gene	6		76913
Mm.262039	Capza2	capping protein (actin filament) muscle Z-line, alpha 2	6	6 3.05 cM	12343
Gene Ontology	actin binding | actin cytoskeleton organization and biogenesis | F-actin capping protein complex
Human Homolog	CAPZA2[capping protein (actin filament) muscle Z-line, alpha 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 167 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GGCAGCAAAC (6) 14.7 0.0147 P8 Cb GC GAGACTTGGG (5) 4.9 0.0049 P8 Cb GC CTCTTATTGA (2) 3.3 0.0033 P8 Cb GC GAAGATGGAG (7) 3.3 0.0033 P8 Cb GC TCTGAAAAAA (10) 3.3 0.0033 P8 Cb GC TCTTCAGTTG (5) 3.3 0.0033 P8 Cb GC TTGCTGCTGG (11) 3.3 0.0033 P8 Cb GC TCTCAGTTGA (3) 1.6 0.0016 P8 Cb GC TGGACTCCCA (2) 1.6 0.0016 P8 Cb GC TTTGTAATAC (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TCTGAAAAAA (10) 16.2 0.0162 Cb medulloblastoma CTGGAAGAGG (3) 11.6 0.0116 Cb medulloblastoma GGCAGCAAAC (6) 9.2 0.0092 Cb medulloblastoma TTGTTTAATT (2) 6.9 0.0069 Cb medulloblastoma TCTCAGTTGA (3) 4.6 0.0046 Cb medulloblastoma GAGACCTGGG (4) 2.3 0.0023 Cb medulloblastoma TCTTCAGTTG (5) 2.3 0.0023 Cb medulloblastoma TTGCTGCTGG (11) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GGCAGCAAAC (6) 20.5 0.0205 P8 GC+1d culture GAAGATGGAG (7) 10.3 0.0103 P8 GC+1d culture TCTTCAGTTG (5) 8 0.008 P8 GC+1d culture TCTCAGTTGA (3) 5.7 0.0057 P8 GC+1d culture TTTGTAATAC (3) 5.7 0.0057 P8 GC+1d culture TCTGAAAAAA (10) 4.6 0.0046 P8 GC+1d culture TTGTTTAATT (2) 2.3 0.0023 P8 GC+1d culture GAGACCTGGG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAGATGGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture GGCAGCAAAC (6) 9.4 0.0094 P8 GC+SHH+1d culture TTGCTGCTGG (11) 8.2 0.0082 P8 GC+SHH+1d culture TCTCAGTTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TCTGAAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture TTGTTTAATT (2) 3.5 0.0035 P8 GC+SHH+1d culture TTTGTAATAC (3) 3.5 0.0035 P8 GC+SHH+1d culture AACCACAATG (5) 1.2 0.0012 P8 GC+SHH+1d culture CTCTTATTGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGACTTGGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCAGTTG (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GAAGATGGAG (7) 21 0.021 3T3 fibroblasts TTGCTGCTGG (11) 17.5 0.0175 3T3 fibroblasts TCTTCAGTTG (5) 10.5 0.0105 3T3 fibroblasts GAGATGGAGA (6) 3.5 0.0035 3T3 fibroblasts TCTCAGTTGA (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GGCAGCAAAC (6) 89.1 0.0891 E15 cortex GAAGATGGAG (7) 9.9 0.0099 E15 cortex GAGACTTGGG (5) 9.9 0.0099 E15 cortex CTGGAAGAGG (3) 4.9 0.0049 E15 cortex TCTGAAAAAA (10) 4.9 0.0049 E15 cortex TTGCTGCTGG (11) 4.9 0.0049 E15 cortex TTGTTTAATT (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GGCAGCAAAC (6) 22.7 0.0227 P1 cortex CTGGAAGAGG (3) 9.1 0.0091 P1 cortex GAAGATGGAG (7) 4.5 0.0045 P1 cortex TTGCTGCTGG (11) 4.5 0.0045 P1 cortex TTTGTAATAC (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GGCAGCAAAC (6) 9.1 0.0091 Hypothalamus TTGCTGCTGG (11) 9.1 0.0091 Hypothalamus TTTGTAATAC (3) 7.2 0.0072 Hypothalamus TCTCAGTTGA (3) 5.4 0.0054 Hypothalamus TCTGAAAAAA (10) 5.4 0.0054 Hypothalamus CTGGAAGAGG (3) 3.6 0.0036 Hypothalamus GAAGATGGAG (7) 3.6 0.0036 Hypothalamus GAGACTTGGG (5) 1.8 0.0018 Hypothalamus TCTTCAGTTG (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAGATGGAG (7) 15 0.015 E12.5 retina TCTGAAAAAA (10) 5.6 0.0056 E12.5 retina GAAACTTGGG (13) 3.8 0.0038 E12.5 retina GGCAGCAAAC (6) 3.8 0.0038 E12.5 retina GAGACTTGGG (5) 1.9 0.0019 E12.5 retina TCTCAGTTGA (3) 1.9 0.0019 E12.5 retina TTTGTAATAC (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTGTTTAATT (2) 9.1 0.0091 E14.5 retina TCTGAAAAAA (10) 3.6 0.0036 E14.5 retina GAAACTTGGG (13) 1.8 0.0018 E14.5 retina GAAGATGGAG (7) 1.8 0.0018 E14.5 retina GAGATGGAGA (6) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TTGCTGCTGG (11) 9.1 0.0091 E16.5 retina GGCAGCAAAC (6) 5.4 0.0054 E16.5 retina TCTGAAAAAA (10) 5.4 0.0054 E16.5 retina GAAGATGGAG (7) 1.8 0.0018 E16.5 retina GAGACTTGGG (5) 1.8 0.0018 E16.5 retina GAGATGGAGA (6) 1.8 0.0018 E16.5 retina TCTCAGTTGA (3) 1.8 0.0018 E16.5 retina TTTGTAATAC (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TCTGAAAAAA (10) 9.1 0.0091 E18.5 retina GAAGATGGAG (7) 5.5 0.0055 E18.5 retina TTGTTTAATT (2) 5.5 0.0055 E18.5 retina TGGACTCCCA (2) 3.6 0.0036 E18.5 retina TTGCTGCTGG (11) 3.6 0.0036 E18.5 retina GAGATGGAGA (6) 1.8 0.0018 E18.5 retina TCTCAGTTGA (3) 1.8 0.0018 E18.5 retina TCTTCAGTTG (5) 1.8 0.0018 E18.5 retina TTTGTAATAC (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAAGATGGAG (7) 17.7 0.0177 P0.5 retina GGCAGCAAAC (6) 7.9 0.0079 P0.5 retina CTGGAAGAGG (3) 2 0.002 P0.5 retina GAGACTTGGG (5) 2 0.002 P0.5 retina TTGCTGCTGG (11) 2 0.002 P0.5 retina TTTGTAATAC (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAGATGGAG (7) 14.1 0.0141 P2.5 retina GGCAGCAAAC (6) 10.6 0.0106 P2.5 retina TCTGAAAAAA (10) 3.5 0.0035 P2.5 retina TCTTCAGTTG (5) 3.5 0.0035 P2.5 retina GAAACTTGGG (13) 1.8 0.0018 P2.5 retina GAGACTTGGG (5) 1.8 0.0018 P2.5 retina TTTGTAATAC (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GGCAGCAAAC (6) 13.9 0.0139 P4.5 retina CTCTTATTGA (2) 4 0.004 P4.5 retina GAAGATGGAG (7) 4 0.004 P4.5 retina TCTCAGTTGA (3) 2 0.002 P4.5 retina TCTTCAGTTG (5) 2 0.002 P4.5 retina TTGCTGCTGG (11) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGCAGCAAAC (6) 25 0.025 P6.5 retina CTCTTATTGA (2) 3.3 0.0033 P6.5 retina GAAGATGGAG (7) 3.3 0.0033 P6.5 retina TCTCAGTTGA (3) 1.7 0.0017 P6.5 retina TCTTCAGTTG (5) 1.7 0.0017 P6.5 retina TTGCTGCTGG (11) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GGCAGCAAAC (6) 33.4 0.0334 P10.5 crx- retina TCTGAAAAAA (10) 5.6 0.0056 P10.5 crx- retina TCTTCAGTTG (5) 3.7 0.0037 P10.5 crx- retina TTGTTTAATT (2) 3.7 0.0037 P10.5 crx- retina GAGACCTGGG (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGCAGCAAAC (6) 17.3 0.0173 P10.5 crx+ retina GAAGATGGAG (7) 3.8 0.0038 P10.5 crx+ retina TCTCAGTTGA (3) 3.8 0.0038 P10.5 crx+ retina TTGCTGCTGG (11) 3.8 0.0038 P10.5 crx+ retina TTGTTTAATT (2) 3.8 0.0038 P10.5 crx+ retina TTTGTAATAC (3) 3.8 0.0038 P10.5 crx+ retina AACATTTCTC (3) 1.9 0.0019 P10.5 crx+ retina AACCACAATG (5) 1.9 0.0019 P10.5 crx+ retina CTGGAAGAGG (3) 1.9 0.0019 P10.5 crx+ retina GAGACCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GAGACTTGGG (5) 1.9 0.0019 P10.5 crx+ retina TCTGAAAAAA (10) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GGCAGCAAAC (6) 18.5 0.0185 Adult retinal GAAACTTGGG (13) 3.7 0.0037 Adult retinal GAAGATGGAG (7) 3.7 0.0037 Adult retinal TTGTTTAATT (2) 3.7 0.0037 Adult retinal CTGGAAGAGG (3) 1.9 0.0019 Adult retinal TCTGAAAAAA (10) 1.9 0.0019 Adult retinal TTGCTGCTGG (11) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAGATGGAG (7) 5.7 0.0057 ONL AACATTTCTC (3) 1.9 0.0019 ONL AACCACAATG (5) 1.9 0.0019 ONL TCTTCAGTTG (5) 1.9 0.0019 ONL TTGTTTAATT (2) 1.9 0.0019 ONL TTTGTAATAC (3) 1.9 0.0019