Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26237	Cry1	cryptochrome 1 (photolyase-like)	10	10 46.0 cM	12952
Gene Ontology	circadian rhythm | circadian rhythm | lyase activity | nucleus | protein binding | receptor activity
Human Homolog	CRY1[cryptochrome 1 (photolyase-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCCTCTGGC TAATCAAGTG 8.2 0.0082 Cb medulloblastoma GGCCTCTGGC TAATCAAGTG 4.6 0.0046 P8 GC+1d culture GGCCTCTGGC 16 0.016 P8 GC+SHH+1d culture GGCCTCTGGC TAATCAAGTG 19.9 0.0199 E15 cortex GGCCTCTGGC 9.9 0.0099 P1 cortex GGCCTCTGGC 4.5 0.0045 Hypothalamus GGCCTCTGGC 1.8 0.0018 E12.5 retina ATGAGAAATA GGCCTCTGGC 3.8 0.0038 E16.5 retina ATTACGCCAA GGCCTCTGGC 3.6 0.0036 E18.5 retina GGCCTCTGGC TAATCAAGTG 5.4 0.0054 P0.5 retina ATGAGAAATA ATTACGCCAA GGCCTCTGGC 7.9 0.0079 P2.5 retina GGCCTCTGGC TAATCAAGTG 10.6 0.0106 P4.5 retina ATGAGAAATA GGCCTCTGGC TAATCAAGTG 25.8 0.0258 P6.5 retina GGCCTCTGGC 11.7 0.0117 P10.5 crx- retina ATGAGAAATA GGCCTCTGGC TAATCAAGTG 16.8 0.0168 P10.5 crx+ retina ATGAGAAATA GGCCTCTGGC 15.4 0.0154 Adult retinal ATTACGCCAA GGCCTCTGGC TAATCAAGTG 27.8 0.0278 ONL GGCCTCTGGC TAATCAAGTG 13.4 0.0134