Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.262453
Mcts1
malignant T cell amplified sequence 1
X
68995
Human Homolog
MCTS1[malignant T cell amplified sequence 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 95 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGACAAAGC
(
3
)
17.9
0.0179
P8 Cb GC
CTTTGTAGTG (
2
)
16.3
0.0163
P8 Cb GC
AAAAACAAGT (
3
)
4.9
0.0049
P8 Cb GC
GAAAGGGCTG (
4
)
3.3
0.0033
P8 Cb GC
AAGATGTCTG
(
2
)
1.6
0.0016
P8 Cb GC
GAAAACAAAC
(
6
)
1.6
0.0016
Cb medulloblastoma
AAGACAAAGC
(
3
)
13.9
0.0139
Cb medulloblastoma
GAAAACAAAC
(
6
)
11.6
0.0116
Cb medulloblastoma
CTTTGTAGTG (
2
)
6.9
0.0069
Cb medulloblastoma
AAAAACAAGT (
3
)
2.3
0.0023
Cb medulloblastoma
AAGACCAAGC
(
4
)
2.3
0.0023
Cb medulloblastoma
GAAAGGGCTG (
4
)
2.3
0.0023
P8 GC+1d culture
AAGACAAAGC
(
3
)
9.1
0.0091
P8 GC+1d culture
GAAAGGGCTG (
4
)
6.8
0.0068
P8 GC+1d culture
AAAAACAAGT (
3
)
3.4
0.0034
P8 GC+1d culture
CTTTGTAGTG (
2
)
3.4
0.0034
P8 GC+1d culture
AAGACAGAGC (
2
)
1.1
0.0011
P8 GC+1d culture
GAAAACAAAC
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAGGGCTG (
4
)
7
0.007
P8 GC+SHH+1d culture
AAAAACAAGT (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
CTTTGTAGTG (
2
)
5.9
0.0059
P8 GC+SHH+1d culture
AAGACAAAGC
(
3
)
3.5
0.0035
3T3 fibroblasts
AAGACAAAGC
(
3
)
10.5
0.0105
3T3 fibroblasts
GAAAGGGCTG (
4
)
10.5
0.0105
E15 cortex
AAGACAAAGC
(
3
)
9.9
0.0099
E15 cortex
AAAAACAAGT (
3
)
4.9
0.0049
P1 cortex
AAGACAAAGC
(
3
)
18.2
0.0182
P1 cortex
GAAAGGGCTG (
4
)
18.2
0.0182
P1 cortex
TGCTACCACA
(
3
)
4.5
0.0045
Hypothalamus
AAGACAAAGC
(
3
)
12.7
0.0127
Hypothalamus
AAAAACAAGT (
3
)
3.6
0.0036
Hypothalamus
CTTTGTAGTG (
2
)
3.6
0.0036
Hypothalamus
GAAAGGGCTG (
4
)
3.6
0.0036
Hypothalamus
GAAAACAAAC
(
6
)
1.8
0.0018
E12.5 retina
AAGACAAAGC
(
3
)
16.9
0.0169
E12.5 retina
AAAAACAAGT (
3
)
9.4
0.0094
E12.5 retina
GAAAGGGCTG (
4
)
9.4
0.0094
E12.5 retina
CTTTGTAGTG (
2
)
3.8
0.0038
E14.5 retina
AAGACAAAGC
(
3
)
10.9
0.0109
E14.5 retina
GAAAGGGCTG (
4
)
7.3
0.0073
E14.5 retina
AAAAACAAGT (
3
)
1.8
0.0018
E14.5 retina
AAGACCAAGC
(
4
)
1.8
0.0018
E14.5 retina
TGCTACCACA
(
3
)
1.8
0.0018
E16.5 retina
AAGACAAAGC
(
3
)
10.9
0.0109
E16.5 retina
AAGACAGAGC (
2
)
3.6
0.0036
E16.5 retina
AAGATGTCTG
(
2
)
3.6
0.0036
E16.5 retina
GAAAGGGCTG (
4
)
3.6
0.0036
E16.5 retina
AAAAACAAGT (
3
)
1.8
0.0018
E18.5 retina
AAAAACAAGT (
3
)
7.3
0.0073
E18.5 retina
AAGACAAAGC
(
3
)
3.6
0.0036
E18.5 retina
AAGACCAAGC
(
4
)
1.8
0.0018
E18.5 retina
CTTTGTAGTG (
2
)
1.8
0.0018
E18.5 retina
TGCTACCACA
(
3
)
1.8
0.0018
P0.5 retina
GAAAGGGCTG (
4
)
11.8
0.0118
P0.5 retina
AAGACAAAGC
(
3
)
5.9
0.0059
P0.5 retina
AAAAACAAGT (
3
)
3.9
0.0039
P0.5 retina
AAGACAGAGC (
2
)
2
0.002
P0.5 retina
CTTTGTAGTG (
2
)
2
0.002
P2.5 retina
AAGACAAAGC
(
3
)
10.6
0.0106
P2.5 retina
GAAAGGGCTG (
4
)
8.8
0.0088
P2.5 retina
AAAAACAAGT (
3
)
5.3
0.0053
P2.5 retina
CTTTGTAGTG (
2
)
5.3
0.0053
P2.5 retina
AAGACAGAGC (
2
)
3.5
0.0035
P2.5 retina
TGCTACCACA
(
3
)
1.8
0.0018
P4.5 retina
AAGACAAAGC
(
3
)
19.8
0.0198
P4.5 retina
GAAAGGGCTG (
4
)
4
0.004
P4.5 retina
TGCTACCACA
(
3
)
4
0.004
P4.5 retina
AAAAACAAGT (
3
)
2
0.002
P4.5 retina
AAGACCAAGC
(
4
)
2
0.002
P6.5 retina
AAGACAAAGC
(
3
)
18.3
0.0183
P6.5 retina
AAAAACAAGT (
3
)
11.7
0.0117
P6.5 retina
GAAAGGGCTG (
4
)
6.7
0.0067
P6.5 retina
AAGACAGAGC (
2
)
1.7
0.0017
P6.5 retina
AAGATGTCTG
(
2
)
1.7
0.0017
P6.5 retina
TGCTACCACA
(
3
)
1.7
0.0017
P10.5 crx- retina
AAGACAAAGC
(
3
)
11.1
0.0111
P10.5 crx- retina
GAAAGGGCTG (
4
)
11.1
0.0111
P10.5 crx- retina
AAAAACAAGT (
3
)
5.6
0.0056
P10.5 crx- retina
CTTTGTAGTG (
2
)
5.6
0.0056
P10.5 crx- retina
AAGATGTCTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAGACAAAGC
(
3
)
25
0.025
P10.5 crx+ retina
CTTTGTAGTG (
2
)
17.3
0.0173
P10.5 crx+ retina
AAAAACAAGT (
3
)
15.4
0.0154
P10.5 crx+ retina
GAAAGGGCTG (
4
)
5.8
0.0058
P10.5 crx+ retina
AAGATGTCTG
(
2
)
1.9
0.0019
Adult retinal
GAAAGGGCTG (
4
)
14.8
0.0148
Adult retinal
AAGACAAAGC
(
3
)
5.6
0.0056
Adult retinal
AAAAACAAGT (
3
)
3.7
0.0037
Adult retinal
AAGATGTCTG
(
2
)
1.9
0.0019
Adult retinal
CTTTGTAGTG (
2
)
1.9
0.0019
ONL
AAAAACAAGT (
3
)
65.1
0.0651
ONL
GAAAGGGCTG (
4
)
11.5
0.0115
ONL
AAGACAAAGC
(
3
)
7.7
0.0077
ONL
CTTTGTAGTG (
2
)
7.7
0.0077
ONL
AAGATGTCTG
(
2
)
1.9
0.0019
