Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.262480
9030607L20Rik
RIKEN cDNA 9030607L20 gene
2
71513
Mm.262480
2010012F05Rik
RIKEN cDNA 2010012F05 gene
2
75608
Human Homolog
C20orf178[chromosome 20 open reading frame 178]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCTGTGCCC
(
3
)
3.3
0.0033
P8 Cb GC
AAGGCTGCCC
(
3
)
1.6
0.0016
Cb medulloblastoma
TCTACCATCC
(
2
)
4.6
0.0046
Cb medulloblastoma
TGCGTGCGCA
(
2
)
2.3
0.0023
P8 GC+1d culture
GTCTGTGCCC
(
3
)
3.4
0.0034
P8 GC+1d culture
TCTACCATCC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GTCTGTGCCC
(
3
)
7
0.007
P8 GC+SHH+1d culture
TCTACCATCC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCGTGCGCA
(
2
)
3.5
0.0035
3T3 fibroblasts
GTCTGTGCCC
(
3
)
10.5
0.0105
3T3 fibroblasts
TCTACCATCC
(
2
)
3.5
0.0035
E15 cortex
TCTACCATCC
(
2
)
4.9
0.0049
P1 cortex
TCTACCATCC
(
2
)
4.5
0.0045
Hypothalamus
TGCGTGCGCA
(
2
)
5.4
0.0054
Hypothalamus
GTCTGTGCCC
(
3
)
1.8
0.0018
E12.5 retina
AAGGCTGCCC
(
3
)
1.9
0.0019
E14.5 retina
GTCTGTGCCC
(
3
)
5.5
0.0055
E16.5 retina
TCTACCATCC
(
2
)
1.8
0.0018
E18.5 retina
GTCTGTGCCC
(
3
)
3.6
0.0036
E18.5 retina
TGCGTGCGCA
(
2
)
1.8
0.0018
P0.5 retina
TCTACCATCC
(
2
)
9.8
0.0098
P0.5 retina
GTCTGTGCCC
(
3
)
2
0.002
P2.5 retina
GTCTGTGCCC
(
3
)
7
0.007
P2.5 retina
TCTACCATCC
(
2
)
1.8
0.0018
P2.5 retina
TGCGTGCGCA
(
2
)
1.8
0.0018
P4.5 retina
GTCTGTGCCC
(
3
)
4
0.004
P6.5 retina
GTCTGTGCCC
(
3
)
6.7
0.0067
P6.5 retina
TCTACCATCC
(
2
)
3.3
0.0033
P10.5 crx- retina
TCTACCATCC
(
2
)
5.6
0.0056
P10.5 crx- retina
GTCTGTGCCC
(
3
)
3.7
0.0037
P10.5 crx+ retina
GTCTGTGCCC
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGCGTGCGCA
(
2
)
1.9
0.0019
Adult retinal
TCTACCATCC
(
2
)
5.6
0.0056
ONL
AAGGCTGCCC
(
3
)
1.9
0.0019
ONL
GTCTGTGCCC
(
3
)
1.9
0.0019
ONL
TCTACCATCC
(
2
)
1.9
0.0019
