Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262707	0610013E23Rik	RIKEN cDNA 0610013E23 gene	11		76892
Mm.262707	Rps6kb1	ribosomal protein S6 kinase, polypeptide 1	11	11 C	72508
Gene Ontology	ATP binding | cytosolic ribosome (sensu Eukarya) | germ-cell development | kinase activity | protein serine/threonine kinase activity | ribosome biogenesis | structural constituent of ribosome | transferase activity
Human Homolog	RPS6KB1[ribosomal protein S6 kinase, 70kDa, polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCACTGTGC (6) 60.4 0.0604 P8 Cb GC TGCAGACAAA (4) 3.3 0.0033 P8 Cb GC TTTATAGTTC (4) 3.3 0.0033 P8 Cb GC TTACCATATT (2) 1.6 0.0016 Cb medulloblastoma TCCACTGTGC (6) 27.7 0.0277 Cb medulloblastoma GCAGCCACGG (3) 4.6 0.0046 Cb medulloblastoma TTTATAGTTC (4) 2.3 0.0023 P8 GC+1d culture TCCACTGTGC (6) 30.8 0.0308 P8 GC+1d culture TGACTCAACA (3) 3.4 0.0034 P8 GC+1d culture TGCAGACAAA (4) 3.4 0.0034 P8 GC+1d culture TTACCATATT (2) 2.3 0.0023 P8 GC+1d culture GCAGCCACGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TCCACTGTGC (6) 50.3 0.0503 P8 GC+SHH+1d culture CTTGTACCAG (2) 2.3 0.0023 P8 GC+SHH+1d culture TGCAGACAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTACCATATT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTATAGTTC (4) 1.2 0.0012 3T3 fibroblasts TCCACTGTGC (6) 66.6 0.0666 3T3 fibroblasts GCAGATGACT (3) 3.5 0.0035 E15 cortex TCCACTGTGC (6) 9.9 0.0099 E15 cortex TGCAGACAAA (4) 4.9 0.0049 P1 cortex TCCACTGTGC (6) 22.7 0.0227 Hypothalamus TCCACTGTGC (6) 29 0.029 Hypothalamus TGCAGACAAA (4) 3.6 0.0036 Hypothalamus TTACCATATT (2) 1.8 0.0018 E12.5 retina TCCACTGTGC (6) 48.8 0.0488 E12.5 retina TGCAGACAAA (4) 3.8 0.0038 E12.5 retina CTTGTACCAG (2) 1.9 0.0019 E12.5 retina GCAGATGACT (3) 1.9 0.0019 E12.5 retina TTACCATATT (2) 1.9 0.0019 E14.5 retina TCCACTGTGC (6) 40.1 0.0401 E14.5 retina AAGATGCTGG (12) 1.8 0.0018 E14.5 retina TGCAGACAAA (4) 1.8 0.0018 E16.5 retina TCCACTGTGC (6) 96 0.096 E16.5 retina CTTGTACCAG (2) 1.8 0.0018 E18.5 retina TCCACTGTGC (6) 56.4 0.0564 E18.5 retina TTACCATATT (2) 1.8 0.0018 P0.5 retina TCCACTGTGC (6) 60.8 0.0608 P0.5 retina AAGATGCTGG (12) 3.9 0.0039 P0.5 retina TGCAGACAAA (4) 2 0.002 P0.5 retina TTTATAGTTC (4) 2 0.002 P2.5 retina TCCACTGTGC (6) 59.8 0.0598 P2.5 retina TCCCAATGAG (4) 7 0.007 P2.5 retina TGCAGACAAA (4) 7 0.007 P2.5 retina CTTGTACCAG (2) 1.8 0.0018 P2.5 retina TTTATAGTTC (4) 1.8 0.0018 P4.5 retina TCCACTGTGC (6) 25.8 0.0258 P4.5 retina TGCAGACAAA (4) 5.9 0.0059 P4.5 retina AAGATGCTGG (12) 2 0.002 P4.5 retina GCAGATGACT (3) 2 0.002 P6.5 retina TCCACTGTGC (6) 23.3 0.0233 P6.5 retina TGCAGACAAA (4) 1.7 0.0017 P10.5 crx- retina TCCACTGTGC (6) 57.6 0.0576 P10.5 crx- retina TGACTCAACA (3) 1.9 0.0019 P10.5 crx+ retina TCCACTGTGC (6) 38.4 0.0384 P10.5 crx+ retina TGCAGACAAA (4) 7.7 0.0077 P10.5 crx+ retina CTTGTACCAG (2) 3.8 0.0038 P10.5 crx+ retina GCAGCCACGG (3) 1.9 0.0019 Adult retinal TCCACTGTGC (6) 11.1 0.0111 Adult retinal TGCAGACAAA (4) 3.7 0.0037 Adult retinal TGACTCAACA (3) 1.9 0.0019 ONL TCCACTGTGC (6) 7.7 0.0077 ONL TGCAGACAAA (4) 3.8 0.0038 ONL GCAGATGACT (3) 1.9 0.0019 ONL TGACTCAACA (3) 1.9 0.0019