Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262859	Rnf38	ring finger protein 38	4		73469
Gene Ontology	protein binding
Human Homolog	RNF38[ring finger protein 38]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTCTCTGT (5) 4.9 0.0049 P8 Cb GC TCTTGATCCT (2) 3.3 0.0033 P8 Cb GC CCAAGGTGTT (2) 1.6 0.0016 P8 Cb GC GCCTCCGTGA 1.6 0.0016 P8 Cb GC GCGCTGTTTG 1.6 0.0016 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 Cb medulloblastoma GCGCTGTTTG 2.3 0.0023 P8 GC+1d culture GCGCTGTTTG 5.7 0.0057 P8 GC+1d culture CCAAGGTGTT (2) 1.1 0.0011 P8 GC+1d culture GCCTCCGTGA 1.1 0.0011 P8 GC+1d culture GGACTACTTA (2) 1.1 0.0011 P8 GC+1d culture GGCAACAATG (4) 1.1 0.0011 P8 GC+1d culture TATATATGGA (5) 1.1 0.0011 P8 GC+1d culture TGAATATTTT (2) 1.1 0.0011 P8 GC+1d culture TGTGATTTTG (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture AATCGCGATA 3.5 0.0035 P8 GC+SHH+1d culture ATGTCTCTGT (5) 3.5 0.0035 P8 GC+SHH+1d culture ACCTGATTTT 1.2 0.0012 P8 GC+SHH+1d culture GCGCTGTTTG 1.2 0.0012 P8 GC+SHH+1d culture GGACTACTTA (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTTGATCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAATATTTT (2) 1.2 0.0012 3T3 fibroblasts GGACTACTTA (2) 7 0.007 3T3 fibroblasts TCTTGATCCT (2) 3.5 0.0035 E15 cortex GCGCTGTTTG 9.9 0.0099 E15 cortex TGAAGAGGAA (5) 4.9 0.0049 P1 cortex ATGTCTCTGT (5) 13.6 0.0136 P1 cortex GCGCTGTTTG 9.1 0.0091 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus ATGTCTCTGT (5) 1.8 0.0018 E12.5 retina ATGTCTCTGT (5) 3.8 0.0038 E12.5 retina AATCGCGATA 1.9 0.0019 E12.5 retina TGAATATTTT (2) 1.9 0.0019 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E14.5 retina ATGTCTCTGT (5) 9.1 0.0091 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina TATATATGGA (5) 1.8 0.0018 E14.5 retina TGAATATTTT (2) 1.8 0.0018 E16.5 retina ATGTCTCTGT (5) 5.4 0.0054 E16.5 retina TGAAGAGGAA (5) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GCCTCCGTGA 1.8 0.0018 E16.5 retina GCGCTGTTTG 1.8 0.0018 E16.5 retina GGCAACAATG (4) 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 E18.5 retina GCGCTGTTTG 3.6 0.0036 E18.5 retina ATGTCTCTGT (5) 1.8 0.0018 P0.5 retina AATCGCGATA 2 0.002 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina CCAAGGTGTT (2) 2 0.002 P0.5 retina GCGCTGTTTG 2 0.002 P0.5 retina TGAAGAGGAA (5) 2 0.002 P0.5 retina TGTGATTTTG (2) 2 0.002 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina AATCGCGATA 5.3 0.0053 P2.5 retina ATGTCTCTGT (5) 3.5 0.0035 P2.5 retina GCGCTGTTTG 3.5 0.0035 P2.5 retina CCAAGGTGTT (2) 1.8 0.0018 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P4.5 retina ATGTCTCTGT (5) 9.9 0.0099 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina TGAATATTTT (2) 4 0.004 P4.5 retina AATCGCGATA 2 0.002 P4.5 retina GCCTCCGTGA 2 0.002 P4.5 retina GGCAACAATG (4) 2 0.002 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P6.5 retina ATGTCTCTGT (5) 3.3 0.0033 P6.5 retina GCGCTGTTTG 1.7 0.0017 P6.5 retina TATATATGGA (5) 1.7 0.0017 P6.5 retina TGTGATTTTG (2) 1.7 0.0017 P10.5 crx- retina GCGCTGTTTG 5.6 0.0056 P10.5 crx- retina ATGTCTCTGT (5) 3.7 0.0037 P10.5 crx- retina TATATATGGA (5) 1.9 0.0019 P10.5 crx- retina TGAAGAGGAA (5) 1.9 0.0019 P10.5 crx+ retina ATGTCTCTGT (5) 7.7 0.0077 P10.5 crx+ retina TGAATATTTT (2) 3.8 0.0038 P10.5 crx+ retina GGACTACTTA (2) 1.9 0.0019 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal AATCGCGATA 1.9 0.0019 Adult retinal GCGCTGTTTG 1.9 0.0019 Adult retinal GGCAACAATG (4) 1.9 0.0019 Adult retinal TATATATGGA (5) 1.9 0.0019 Adult retinal TGTGATTTTG (2) 1.9 0.0019 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL ACCTGATTTT 3.8 0.0038 ONL AATCGCGATA 1.9 0.0019 ONL TGAATATTTT (2) 1.9 0.0019